RNA id: TU68664


Basic Information

Item Value
RNA id TU68664
length 256
lncRNA type inter_gene
GC content 0.63
exon number 1
gene id G54951
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 27322540 ~ 27322795 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCCCACTGTACAGCAGGGAGGTTATCTGCCCCCGCAGCTCCCCCTCCTGGTGGTCTTCCGTGGCCACATTGATAAAGAGCTCGTTCTGCAGCAGCATGTGGATGTGGCGCGCCTCCAGATGGACCCAGGTCCCAGTGGCGCGGCCATCGTGGTACTCTCCGCTCAGGTCATGCAGAACAGTGCGTTTGCTCCTCCGCCGCGGCTTTGTCTCGATCGTCACGCCGACCACCTTACCGGACACGCCCACCACCTGCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU68663 lncRNA upstream 350 27321949 ~ 27322190 (+) True G54950
TU68662 lncRNA upstream 2569 27319768 ~ 27319971 (+) True G54949
TU68661 lncRNA upstream 5383 27313955 ~ 27317157 (+) True G54948
TU68649 lncRNA upstream 204617 27110880 ~ 27117923 (+) True G54936
TU68641 lncRNA upstream 225767 27096537 ~ 27096773 (+) True G54928
TU68684 lncRNA downstream 97734 27420529 ~ 27422675 (+) True G54969
TU68713 lncRNA downstream 203272 27526067 ~ 27527494 (+) True G54997
TU68786 lncRNA downstream 300721 27623516 ~ 27626011 (+) True AMCG00009164
TU68950 lncRNA downstream 1002564 28325359 ~ 28325659 (+) True G55184
TU68975 lncRNA downstream 1056720 28379515 ~ 28380370 (+) True G55202
AMCG00009147 mRNA upstream 217649 27102496 ~ 27104891 (+) True AMCG00009147
AMCG00009144 mRNA upstream 234682 27077814 ~ 27087858 (+) True AMCG00009144
AMCG00009146 mRNA upstream 263580 27037329 ~ 27058960 (+) True AMCG00009146
AMCG00009145 mRNA upstream 289583 26994958 ~ 27032957 (+) True AMCG00009145
AMCG00009140 mRNA upstream 340689 26969885 ~ 26981851 (+) True AMCG00009140
AMCG00009150 mRNA downstream 41510 27364305 ~ 27377706 (+) True AMCG00009150
AMCG00009154 mRNA downstream 61973 27384768 ~ 27389302 (+) True AMCG00009154
AMCG00009153 mRNA downstream 80493 27403288 ~ 27416448 (+) True AMCG00009153
AMCG00009152 mRNA downstream 138435 27461230 ~ 27477658 (+) True AMCG00009152
AMCG00009162 mRNA downstream 170606 27493401 ~ 27494525 (+) True AMCG00009162
TU68288 other upstream 1734930 25584892 ~ 25587610 (+) False AMCG00009108
TU68059 other upstream 2404677 24915029 ~ 24917863 (+) False AMCG00009088
TU68049 other upstream 2506006 24812618 ~ 24816534 (+) True AMCG00009085
TU67814 other upstream 3346634 23883317 ~ 23975906 (+) True G54263
TU67408 other upstream 6028639 21292241 ~ 21293901 (+) True G53917
TU68775 other downstream 290788 27613583 ~ 27617378 (+) False AMCG00009164
TU69158 other downstream 1443659 28766454 ~ 28777621 (+) False AMCG00009204
TU69199 other downstream 1606097 28928892 ~ 29011768 (+) True AMCG00009207
TU69266 other downstream 1780845 29103640 ~ 29106908 (+) True AMCG00009208
TU69269 other downstream 1780845 29103640 ~ 29106908 (+) False AMCG00009208

Expression Profile