RNA id: AMCG00010137


Basic Information

Item Value
RNA id AMCG00010137
length 675
RNA type mRNA
GC content 0.54
exon number 1
gene id AMCG00010137
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 16058513 ~ 16059187 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATATGCTGGCAGGCCATCATGCAGTGCCAGGGAGAGGTAGAGTGCAACTATGCGTACAGCCAGTACACGCATGCTTGTGCCCCCGTAATGCGGGGGGCCAGACACCGATGTCCCAGTCACTGCATCTCTTCACTCATCCAGCTCAACCAGACCAAGAATGGACCTGCTCTGGAGGACTGCGACTGTGCAGCGGACGAGCTCTGCAGAAGCACCAAGCGTGCAATAGAGCCCTGCTTGCCCAGGACTAGTGGGGTGATGGGCTGCACAGAGGCCCGGCGCCAGTGCGATAGAGACCCCCAGTGCAGCCTGGCGATGCACAATTATTTAATCCACTGTGGGAAACTTTTCAGTGGGATTCGATGCACAGAATCGTGCCGGAATGTGATCCGAGATATGTTGCATATGCCCAAGGCAGCGCTTTTGGATACATGCGTCTGTGATGGCATTGAGAGACCCATCTGCGAGTCTGTAAAAATCAATATGCAAACTCTGTGCTTTGGGGCCGATGATAACACCGGTAGCGGCTGGACAATGGACTCGGACGAAGAGCTGGATGAAGGCgacatggaggagagagatGTCCCCACAGTGGAAAGTGCCGGGGATCTTTTAAGAGCGAAAGAGGCTTGGACTGTGATGGCATCCATTTTGCTCCTATTGCCTCTTCTGTAA

Function

GO: NA

KEGG:

id description
K06232 GAS1; growth arrest-specific 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU97549 lncRNA downstream 26131 16032089 ~ 16032382 (-) True G78190
TU97501 lncRNA downstream 267517 15788763 ~ 15790996 (-) True G78144
TU97442 lncRNA downstream 415618 15642157 ~ 15642895 (-) True G78099
TU97440 lncRNA downstream 425305 15631648 ~ 15633208 (-) True G78097
TU97345 lncRNA downstream 875119 15183112 ~ 15183394 (-) True G78014
TU97592 lncRNA upstream 150132 16209319 ~ 16213933 (-) True AMCG00010142
TU97597 lncRNA upstream 173219 16232406 ~ 16236788 (-) True G78226
TU97764 lncRNA upstream 1128832 17188019 ~ 17188849 (-) True G78365
TU97830 lncRNA upstream 1231924 17291111 ~ 17295515 (-) False AMCG00010169
TU97836 lncRNA upstream 1238255 17297442 ~ 17298204 (-) True G78422
AMCG00010130 mRNA downstream 128931 15920540 ~ 15929582 (-) True AMCG00010130
AMCG00010129 mRNA downstream 261435 15791118 ~ 15797078 (-) True AMCG00010129
AMCG00010132 mRNA downstream 322803 15720175 ~ 15735710 (-) True AMCG00010132
AMCG00010131 mRNA downstream 362687 15676288 ~ 15695826 (-) True AMCG00010131
AMCG00010133 mRNA downstream 384513 15655792 ~ 15674000 (-) True AMCG00010133
AMCG00010142 mRNA upstream 154391 16213578 ~ 16224041 (-) False AMCG00010142
AMCG00010143 mRNA upstream 165984 16225171 ~ 16229672 (-) True AMCG00010143
AMCG00010147 mRNA upstream 593258 16652445 ~ 16663560 (-) True AMCG00010147
AMCG00010146 mRNA upstream 620058 16679245 ~ 16680222 (-) True AMCG00010146
AMCG00010148 mRNA upstream 636696 16695883 ~ 16696863 (-) True AMCG00010148
TU96773 other downstream 4329348 11728503 ~ 11729165 (-) True G77544
TU95829 other downstream 8995692 7057805 ~ 7062821 (-) True G76762
TU95819 other downstream 9121445 6936718 ~ 6937068 (-) True G76752
TU95738 other downstream 9389679 6666606 ~ 6668834 (-) False G76684
TU95471 other downstream 10157529 5894675 ~ 5900984 (-) True G76463
TU98065 other upstream 1781805 17840992 ~ 17844389 (-) False AMCG00010188
TU98067 other upstream 1793680 17852867 ~ 17855730 (-) False AMCG00010190
TU98072 other upstream 1886048 17945235 ~ 17945761 (-) True G78610
TU98705 other upstream 4871984 20931171 ~ 20941393 (-) True G79147
TU98765 other upstream 5016754 21075941 ~ 21081825 (-) False AMCG00010247

Expression Profile