RNA id: TU97549



Basic Information


Item Value
RNA id TU97549
length 294
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G78190
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 16032089 ~ 16032382 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TAACATCTGTAACAAAGTAACACTTAATTCAAGTAACATTGTCACTCTCTCCCCCTGATTCTGATCTCACTGTGatattgtgtaatttaaatatattggaaaAGGCTTTACCATGTGGAAAATATAGGATATGATAAAGATACTCTCATGTATATTAATTTGTCAGCAGGGTCTGTGTGCCCTGGTCTTAGGGTTAATTTTAAAGGGTTGGTTTATTAAATTCAGATTTGAATTTACATGTTACGTGAAAGTATTGGAAAGTTGTTACatgttaaactgaaaaaatatataatg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97501 lncRNA downstream 241093 15788763 ~ 15790996 (-) True G78144
TU97442 lncRNA downstream 389194 15642157 ~ 15642895 (-) True G78099
TU97440 lncRNA downstream 398881 15631648 ~ 15633208 (-) True G78097
TU97345 lncRNA downstream 848695 15183112 ~ 15183394 (-) True G78014
TU97320 lncRNA downstream 954244 15077590 ~ 15077845 (-) True G77992
TU97592 lncRNA upstream 176937 16209319 ~ 16213933 (-) True AMCG00010142
TU97597 lncRNA upstream 200024 16232406 ~ 16236788 (-) True G78226
TU97764 lncRNA upstream 1155637 17188019 ~ 17188849 (-) True G78365
TU97830 lncRNA upstream 1258729 17291111 ~ 17295515 (-) False AMCG00010169
TU97836 lncRNA upstream 1265060 17297442 ~ 17298204 (-) True G78422
AMCG00010130 mRNA downstream 102507 15920540 ~ 15929582 (-) True AMCG00010130
AMCG00010129 mRNA downstream 235011 15791118 ~ 15797078 (-) True AMCG00010129
AMCG00010132 mRNA downstream 296379 15720175 ~ 15735710 (-) True AMCG00010132
AMCG00010131 mRNA downstream 336263 15676288 ~ 15695826 (-) True AMCG00010131
AMCG00010133 mRNA downstream 358089 15655792 ~ 15674000 (-) True AMCG00010133
AMCG00010137 mRNA upstream 26131 16058513 ~ 16059187 (-) True AMCG00010137
AMCG00010142 mRNA upstream 181196 16213578 ~ 16224041 (-) False AMCG00010142
AMCG00010143 mRNA upstream 192789 16225171 ~ 16229672 (-) True AMCG00010143
AMCG00010147 mRNA upstream 620063 16652445 ~ 16663560 (-) True AMCG00010147
AMCG00010146 mRNA upstream 646863 16679245 ~ 16680222 (-) True AMCG00010146
TU96773 other downstream 4302924 11728503 ~ 11729165 (-) True G77544
TU95829 other downstream 8969268 7057805 ~ 7062821 (-) True G76762
TU95819 other downstream 9095021 6936718 ~ 6937068 (-) True G76752
TU95738 other downstream 9363255 6666606 ~ 6668834 (-) False G76684
TU95471 other downstream 10131105 5894675 ~ 5900984 (-) True G76463
TU98065 other upstream 1808610 17840992 ~ 17844389 (-) False AMCG00010188
TU98067 other upstream 1820485 17852867 ~ 17855730 (-) False AMCG00010190
TU98072 other upstream 1912853 17945235 ~ 17945761 (-) True G78610
TU98705 other upstream 4898789 20931171 ~ 20941393 (-) True G79147
TU98765 other upstream 5043559 21075941 ~ 21081825 (-) False AMCG00010247

Expression Profile