RNA id: AMCG00010170



Basic Information


Item Value
RNA id AMCG00010170
length 297
RNA type mRNA
GC content 0.62
exon number 1
gene id AMCG00010170
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 17353153 ~ 17353449 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAGATCTTGGCCGGCGCCGCGTTGGTCATCTGGTTGTTTCCATGTTGCCGGAAGTGGGAGGAGGGCGACACCATGAACACGTGGTCTCCTCGTATCCCCGCGGAACCGGCGCCGAAAGCCAACAACCACCGGGTGAGGAGCAGGCCGCCCATCGACATCGCCAGCATAACCACCCGGTCGGACAGCAGTGTCCCCTACAGAAGGGACTCCCTGGACGACGGAGATTTCCGGGCCCCCAAGAAAATGAACAGACCCCACGTTGTCCGCAATCATCCCGCTGACGCCGACCTGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97851 lncRNA downstream 42636 17310162 ~ 17310517 (-) True G78433
TU97850 lncRNA downstream 43182 17309582 ~ 17309971 (-) True G78432
TU97849 lncRNA downstream 44237 17308710 ~ 17308916 (-) True G78431
TU97848 lncRNA downstream 44887 17307850 ~ 17308266 (-) True G78430
TU97847 lncRNA downstream 46152 17306377 ~ 17307001 (-) True G78429
TU97852 lncRNA upstream 19352 17372801 ~ 17375304 (-) True G78434
TU97897 lncRNA upstream 50957 17404406 ~ 17405317 (-) True G78468
TU97899 lncRNA upstream 54542 17407991 ~ 17408199 (-) True G78470
TU97945 lncRNA upstream 104495 17457944 ~ 17458473 (-) True G78508
TU97947 lncRNA upstream 105440 17458889 ~ 17460504 (-) True G78509
AMCG00010171 mRNA downstream 7591 17345266 ~ 17345562 (-) True AMCG00010171
AMCG00010172 mRNA downstream 9251 17343278 ~ 17343902 (-) True AMCG00010172
AMCG00010169 mRNA downstream 60315 17282646 ~ 17292838 (-) True AMCG00010169
AMCG00010159 mRNA downstream 139869 17194002 ~ 17213284 (-) True AMCG00010159
AMCG00010157 mRNA downstream 166215 17168595 ~ 17186938 (-) True AMCG00010157
AMCG00010179 mRNA upstream 26739 17380188 ~ 17388056 (-) True AMCG00010179
AMCG00010178 mRNA upstream 41688 17395137 ~ 17403507 (-) True AMCG00010178
AMCG00010180 mRNA upstream 86734 17440183 ~ 17452488 (-) True AMCG00010180
AMCG00010182 mRNA upstream 111663 17465112 ~ 17473608 (-) True AMCG00010182
AMCG00010183 mRNA upstream 120407 17473856 ~ 17478791 (-) True AMCG00010183
TU96773 other downstream 5623988 11728503 ~ 11729165 (-) True G77544
TU95829 other downstream 10290332 7057805 ~ 7062821 (-) True G76762
TU95819 other downstream 10416085 6936718 ~ 6937068 (-) True G76752
TU95738 other downstream 10684319 6666606 ~ 6668834 (-) False G76684
TU95471 other downstream 11452169 5894675 ~ 5900984 (-) True G76463
TU98065 other upstream 487543 17840992 ~ 17844389 (-) False AMCG00010188
TU98067 other upstream 499418 17852867 ~ 17855730 (-) False AMCG00010190
TU98072 other upstream 591786 17945235 ~ 17945761 (-) True G78610
TU98705 other upstream 3577722 20931171 ~ 20941393 (-) True G79147
TU98765 other upstream 3722492 21075941 ~ 21081825 (-) False AMCG00010247

Expression Profile