RNA id: TU97897



Basic Information


Item Value
RNA id TU97897
length 469
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G78468
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 17404406 ~ 17405317 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGCAGAGATATAATTAACATTAAGCCTTAAGAACCACATCTAACGTGTATGTCCTTATATTGTCAAAGTTGTCCAGGCCTTTATGTGACATATGCATCACCCTGGGTTCCTAAAGATTAAAACAGACACATTGGAGACAACACAGGAGTTTCCTTTATTCAGCTGCGAAGGCCACAACAGCCCAGCTATGACAACCCCATCACAAACTGTCAAGTTATATAAAAGTAGATGAACACAAAGCCATTGCCACTGACCTGTTCTCCAGCCGATCGTACAGAAAGGAGTTGTCAGTGCGAAGGACAAACACGATGTGGAACCAGCGTTCAGGGAAGAAATCACAGCCGTGGTAATCCACGATCACACCGCCCTCTGCCATCTGCTCCTCCAGCTCATCAACCACCTGCAACTCCCTGTCCTCATCCAACACTGGACAATTATATTCTTCGTCAAACCCATCATACAGCTCCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97852 lncRNA downstream 29102 17372801 ~ 17375304 (-) True G78434
TU97851 lncRNA downstream 93889 17310162 ~ 17310517 (-) True G78433
TU97850 lncRNA downstream 94435 17309582 ~ 17309971 (-) True G78432
TU97849 lncRNA downstream 95490 17308710 ~ 17308916 (-) True G78431
TU97848 lncRNA downstream 96140 17307850 ~ 17308266 (-) True G78430
TU97899 lncRNA upstream 2674 17407991 ~ 17408199 (-) True G78470
TU97945 lncRNA upstream 52627 17457944 ~ 17458473 (-) True G78508
TU97947 lncRNA upstream 53572 17458889 ~ 17460504 (-) True G78509
TU97948 lncRNA upstream 58160 17463477 ~ 17464018 (-) True G78510
TU97949 lncRNA upstream 58909 17464226 ~ 17464563 (-) True G78511
AMCG00010178 mRNA downstream 899 17395137 ~ 17403507 (-) True AMCG00010178
AMCG00010179 mRNA downstream 16350 17380188 ~ 17388056 (-) True AMCG00010179
AMCG00010170 mRNA downstream 50957 17353153 ~ 17353449 (-) True AMCG00010170
AMCG00010171 mRNA downstream 58844 17345266 ~ 17345562 (-) True AMCG00010171
AMCG00010172 mRNA downstream 60504 17343278 ~ 17343902 (-) True AMCG00010172
AMCG00010180 mRNA upstream 34866 17440183 ~ 17452488 (-) True AMCG00010180
AMCG00010182 mRNA upstream 59795 17465112 ~ 17473608 (-) True AMCG00010182
AMCG00010183 mRNA upstream 68539 17473856 ~ 17478791 (-) True AMCG00010183
AMCG00010181 mRNA upstream 78188 17483505 ~ 17493788 (-) True AMCG00010181
AMCG00010189 mRNA upstream 417352 17822669 ~ 17825492 (-) True AMCG00010189
TU96773 other downstream 5675241 11728503 ~ 11729165 (-) True G77544
TU95829 other downstream 10341585 7057805 ~ 7062821 (-) True G76762
TU95819 other downstream 10467338 6936718 ~ 6937068 (-) True G76752
TU95738 other downstream 10735572 6666606 ~ 6668834 (-) False G76684
TU95471 other downstream 11503422 5894675 ~ 5900984 (-) True G76463
TU98065 other upstream 435675 17840992 ~ 17844389 (-) False AMCG00010188
TU98067 other upstream 447550 17852867 ~ 17855730 (-) False AMCG00010190
TU98072 other upstream 539918 17945235 ~ 17945761 (-) True G78610
TU98705 other upstream 3525854 20931171 ~ 20941393 (-) True G79147
TU98765 other upstream 3670624 21075941 ~ 21081825 (-) False AMCG00010247

Expression Profile