RNA id: TU97849



Basic Information


Item Value
RNA id TU97849
length 207
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G78431
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 17308710 ~ 17308916 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AGGTTGTGTATATATTCGATGCTATATATCTTTCTAGAGGCAGAAGGAGGCATTCACAGGCTTCGTACCAgtggggggagaggagagagggacgtctgtctgtgtctgtcctgcACTGCTGTCGTTTTCATCCTGCGTCTCAGCCGATGGATGTCAATCTCCTGCTTCAACAGGTCGATGTCTGCTCTCATTGCCTTTATTTTCTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97848 lncRNA downstream 444 17307850 ~ 17308266 (-) True G78430
TU97847 lncRNA downstream 1709 17306377 ~ 17307001 (-) True G78429
TU97846 lncRNA downstream 3059 17304980 ~ 17305651 (-) True G78428
TU97836 lncRNA downstream 10506 17297442 ~ 17298204 (-) True G78422
TU97830 lncRNA downstream 13195 17291111 ~ 17295515 (-) False AMCG00010169
TU97850 lncRNA upstream 666 17309582 ~ 17309971 (-) True G78432
TU97851 lncRNA upstream 1246 17310162 ~ 17310517 (-) True G78433
TU97852 lncRNA upstream 63885 17372801 ~ 17375304 (-) True G78434
TU97897 lncRNA upstream 95490 17404406 ~ 17405317 (-) True G78468
TU97899 lncRNA upstream 99075 17407991 ~ 17408199 (-) True G78470
AMCG00010169 mRNA downstream 15872 17282646 ~ 17292838 (-) True AMCG00010169
AMCG00010159 mRNA downstream 95426 17194002 ~ 17213284 (-) True AMCG00010159
AMCG00010157 mRNA downstream 121772 17168595 ~ 17186938 (-) True AMCG00010157
AMCG00010156 mRNA downstream 141556 17152905 ~ 17167154 (-) True AMCG00010156
AMCG00010158 mRNA downstream 159961 17125229 ~ 17148749 (-) True AMCG00010158
AMCG00010172 mRNA upstream 34362 17343278 ~ 17343902 (-) True AMCG00010172
AMCG00010171 mRNA upstream 36350 17345266 ~ 17345562 (-) True AMCG00010171
AMCG00010170 mRNA upstream 44237 17353153 ~ 17353449 (-) True AMCG00010170
AMCG00010179 mRNA upstream 71272 17380188 ~ 17388056 (-) True AMCG00010179
AMCG00010178 mRNA upstream 86221 17395137 ~ 17403507 (-) True AMCG00010178
TU96773 other downstream 5579545 11728503 ~ 11729165 (-) True G77544
TU95829 other downstream 10245889 7057805 ~ 7062821 (-) True G76762
TU95819 other downstream 10371642 6936718 ~ 6937068 (-) True G76752
TU95738 other downstream 10639876 6666606 ~ 6668834 (-) False G76684
TU95471 other downstream 11407726 5894675 ~ 5900984 (-) True G76463
TU98065 other upstream 532076 17840992 ~ 17844389 (-) False AMCG00010188
TU98067 other upstream 543951 17852867 ~ 17855730 (-) False AMCG00010190
TU98072 other upstream 636319 17945235 ~ 17945761 (-) True G78610
TU98705 other upstream 3622255 20931171 ~ 20941393 (-) True G79147
TU98765 other upstream 3767025 21075941 ~ 21081825 (-) False AMCG00010247

Expression Profile