Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU166876 |
| length | 222 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G133077 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 5854488 ~ 5854709 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0002011 | morphogenesis of an epithelial sheet | biological_process |
| GO:0055113 | epiboly involved in gastrulation with mouth forming second | biological_process |
| GO:0090504 | epiboly | biological_process |
| GO:0001702 | gastrulation with mouth forming second | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU166873 | lncRNA | upstream | 1763 | 5851874 ~ 5852725 (+) | True | G133074 |
| TU166865 | lncRNA | upstream | 9429 | 5844264 ~ 5845059 (+) | True | G133066 |
| TU166859 | lncRNA | upstream | 20447 | 5833815 ~ 5834041 (+) | True | G133060 |
| TU166786 | lncRNA | upstream | 55132 | 5772063 ~ 5799356 (+) | True | G133014 |
| TU166754 | lncRNA | upstream | 171680 | 5682073 ~ 5682808 (+) | True | G132997 |
| TU166889 | lncRNA | downstream | 15236 | 5869945 ~ 5870156 (+) | True | G133090 |
| TU166898 | lncRNA | downstream | 32296 | 5887005 ~ 5888723 (+) | False | AMCG00011837 |
| TU166899 | lncRNA | downstream | 32296 | 5887005 ~ 5887892 (+) | False | AMCG00011837 |
| TU166910 | lncRNA | downstream | 46994 | 5901703 ~ 5902803 (+) | True | G133108 |
| TU166908 | lncRNA | downstream | 51329 | 5906038 ~ 5906986 (+) | False | AMCG00011853 |
| AMCG00011836 | mRNA | upstream | 4480 | 5846142 ~ 5850008 (+) | True | AMCG00011836 |
| AMCG00011835 | mRNA | upstream | 11675 | 5835610 ~ 5842813 (+) | True | AMCG00011835 |
| AMCG00011839 | mRNA | upstream | 29622 | 5818212 ~ 5824866 (+) | True | AMCG00011839 |
| AMCG00011838 | mRNA | upstream | 62211 | 5788969 ~ 5792277 (+) | True | AMCG00011838 |
| AMCG00011830 | mRNA | upstream | 93621 | 5759880 ~ 5760867 (+) | False | AMCG00011830 |
| AMCG00011834 | mRNA | downstream | 17260 | 5871969 ~ 5883438 (+) | True | AMCG00011834 |
| AMCG00011837 | mRNA | downstream | 32208 | 5886917 ~ 5888884 (+) | True | AMCG00011837 |
| AMCG00011853 | mRNA | downstream | 38815 | 5893524 ~ 5907174 (+) | True | AMCG00011853 |
| AMCG00011855 | mRNA | downstream | 55772 | 5910481 ~ 5911354 (+) | True | AMCG00011855 |
| AMCG00011852 | mRNA | downstream | 70198 | 5924907 ~ 5936489 (+) | True | AMCG00011852 |
| TU166858 | other | upstream | 24956 | 5828801 ~ 5829532 (+) | True | G133059 |
| TU166792 | other | upstream | 93240 | 5759858 ~ 5761248 (+) | True | AMCG00011830 |
| TU166232 | other | upstream | 1911126 | 3941933 ~ 3943362 (+) | False | AMCG00011771 |
| TU166218 | other | upstream | 1916096 | 3903675 ~ 3938392 (+) | False | AMCG00011771 |
| TU166214 | other | upstream | 1958309 | 3892381 ~ 3896179 (+) | False | AMCG00011770 |
| TU166896 | other | downstream | 32296 | 5887005 ~ 5887892 (+) | False | AMCG00011837 |
| TU166897 | other | downstream | 32296 | 5887005 ~ 5887892 (+) | False | AMCG00011837 |
| TU167105 | other | downstream | 401241 | 6255950 ~ 6256682 (+) | False | AMCG00011876 |
| TU167207 | other | downstream | 629238 | 6483947 ~ 6489208 (+) | True | G133327 |
| TU167225 | other | downstream | 690679 | 6545388 ~ 6558485 (+) | False | AMCG00011909 |
