RNA id: AMCG00018364


Basic Information

Item Value
RNA id AMCG00018364
length 480
RNA type mRNA
GC content 0.63
exon number 4
gene id AMCG00018364
representative False

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 9239812 ~ 9258202 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGTGCGGAGTGTGACTTGATCGCCCCTCTGCAAGCAGCCAGAGCCCTGCGCTGCACTGCAAGTCTGAGTACCGGGATTGGTTGGGAGCTCCTGCAGAAGGAGGACAATAGGGGTTGCGAGGGGTCGCGGTGTGGCTGTGAGAGTGCAGACTTTCCATTCAGCGCCAGCGAATATGATGGAATGTGCACTCCAGCCAACACACCGGCGACGCCCCCCAACTTCCCTGATGCTCTGACCATGTTCTCGCGCCTCAAGGCCTCGGAGAGCTTCAACAGCAGTAGTCCCATCGCCTCCATGGcaacctcccccccaccacaggTCAGCTGGGccatgaccccccccccccccagccagCAAGGACTGTGGACTCCAGGGCAGCCCCCTTCACAGGCACCCCCTCCAGGCTGGCCGGCCACCGTCACCCACCAAGCATCCTCGGAACAGAAGGCCAGCGTTGCCAtggaggcagagagatga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU145202 lncRNA downstream 25529 9200800 ~ 9215817 (-) True G115949
TU145110 lncRNA downstream 378969 8861873 ~ 8862377 (-) True G115874
TU145067 lncRNA downstream 568495 8666737 ~ 8672851 (-) False AMCG00018339
TU145083 lncRNA downstream 592659 8642346 ~ 8648687 (-) True AMCG00018344
TU145037 lncRNA downstream 722143 8517334 ~ 8519203 (-) True G115807
TU145342 lncRNA upstream 235991 9480910 ~ 9482152 (-) True G116058
TU145352 lncRNA upstream 282573 9527492 ~ 9527736 (-) True G116065
TU145440 lncRNA upstream 529387 9774306 ~ 9777349 (-) True AMCG00018390
TU145444 lncRNA upstream 539511 9784430 ~ 9788579 (-) True G116136
TU145572 lncRNA upstream 898506 10143425 ~ 10144599 (-) True G116236
AMCG00018361 mRNA downstream 23808 9207537 ~ 9217538 (-) True AMCG00018361
AMCG00018363 mRNA downstream 41878 9194038 ~ 9199468 (-) True AMCG00018363
AMCG00018362 mRNA downstream 48405 9190764 ~ 9192941 (-) True AMCG00018362
AMCG00018352 mRNA downstream 325319 8909747 ~ 8916027 (-) True AMCG00018352
AMCG00018353 mRNA downstream 335935 8824642 ~ 8905411 (-) True AMCG00018353
AMCG00018367 mRNA upstream 115381 9360300 ~ 9380160 (-) True AMCG00018367
AMCG00018370 mRNA upstream 202565 9447484 ~ 9470583 (-) True AMCG00018370
AMCG00018378 mRNA upstream 244011 9488930 ~ 9490012 (-) True AMCG00018378
AMCG00018379 mRNA upstream 247308 9492227 ~ 9493398 (-) True AMCG00018379
AMCG00018375 mRNA upstream 278576 9523495 ~ 9526055 (-) True AMCG00018375
TU144767 other downstream 1467454 7743218 ~ 7773892 (-) True G115581
TU144582 other downstream 2598074 6638342 ~ 6643272 (-) False AMCG00018291
TU144568 other downstream 2617733 6618475 ~ 6623613 (-) False AMCG00018291
TU144435 other downstream 3290291 5950421 ~ 5951055 (-) True G115320
TU144300 other downstream 3874592 5356846 ~ 5366754 (-) True AMCG00018251
TU145480 other upstream 674127 9919046 ~ 9924582 (-) True G116165
TU145571 other upstream 884641 10129560 ~ 10136769 (-) False AMCG00018416
TU145658 other upstream 1062671 10307590 ~ 10309195 (-) False AMCG00018424
TU145667 other upstream 1090282 10335201 ~ 10342089 (-) True G116306
TU145668 other upstream 1115210 10360129 ~ 10385216 (-) True G116307

Expression Profile