RNA id: TCONS_00009411


Basic Information

Item Value
RNA id TCONS_00009411
length 14211
RNA type mRNA
GC content 0.47
exon number 34
gene id XLOC_004757
representative False

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 27061720 ~ 27092286 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AGAAGCGCGCGCTGAAGCACGTCTCGCGAGATGTCTGCTCGCTCCGCAACTTGGTCAGCAGTCGTTCGTTCCTCCATTTCGCTGCGTCGAAAGTCTCCTCCCCGCTACCGCTAGATTCAGCGATCCCGGACCCAGTCTCACTCGGACCGTTCTACAACTTGATCCTACGAACCTGCCAGTACCTCACTGGGTACCGAGAGACAGATTGGGAGAATCTCTACACGGATTGAGAACGATTTGATGCGGATGGCGACTCCTTCAGCGAGAATTTAGTAAAAGAAAAGTGCTCGGAAATTTCAGACCCTCAGATGCAGCAGTACACTTGATCTCAGCATCCTGGAAGTGGAAATCACGGAAGAGACTGGTGCTTCATCACATAcagGTTCAGTGTGTAGCAGAGCCGGTTCTGAAGCAGGGCAGTCTGGGGAAAAGGCGGTGCAGCAGCGCACCTGTCCGGCAGAGGCTGTGCTGGGTGGCACCTCCGCGGCTGCGCAGAATGTGGCCGGGCCACCCCAGCATGCCCTGCAGCCAGTCGCAGCTGCCACTCTATCACTGTCATCAGTTGACATCGGCACTGGATTACAGCAGCAGAAGGGGGACTCAAAGACTGCATTTAAAGAACAGGCCATTGCTCACATTCAACAAAACAGCGGCATCAACAATTCAGAGAAGCTATCAGCTGCCCAAAGAGGACTGGTGTCAGCTACAGCTGAAGACTTACAAAAGCTTACTCCATCAGACAGACTTTTTGAGAGCAGTACTGATCTTACGCAAAAACAAGGCTTGCTTTTTGTGtgtaacacaaacaaaacaaggctTGGAAACAGGCAAACCGCTATGGCGGAAGGATCCAGCACAGACCACTGCCAAGATTGGAGCCAACACCATGGAGATACGGGCGGTGTCTCTGCCCCTTTTCAGACCGCAAAGGAACCTTTGCCTCCAGAGACAATCAAATTGGACTACAAGAACGTGTCTGGAAAGGCCACATCTGGAGAAAGCCCCAGTGCCCCAAAAACTGAAGTCACCCCATCTGTCAAAGGTGCAGTTAAGTCAACCGATAAAGACATGGAACACCCAAAACCAACTCCCCTTTTTGAGACAAATCAGACTGCGGCCTCGTCTGTGCTGCAGAAACAAAGTACAACAAATTCAGCGACACAGCTTTGTAAATTTGACTCTAAAGAAACTATGGAAGATGTCACACGAGAtctgcttaaaacaagcaaagaaGATGACATTAGTGAAACCTTGTCAGCTGGAGGAACAAAGCAAGGAATTAGTGGAAATTCTATTTGCTCAGGATATTCATCAAAACAAGGGGGGCAGCACATTACTCCCAACAGAGGAAATAACACTCCAAATGACTCGGATAAGGGCAGCTGTTATCTCACAGAGAACTGTAGTCAAACACAAACGTCTACGCAAAAGACAAGCACCCTTCCAAAAACACCTGGCATCCCCACCTTGGTCGAGAACATACAGTGTGTGCAAGAGCTAAGTTCTCAGTACCTACATATAAACCCCAAAATGGTTACTTTGTCTAAAGAGACCAGTACAAGGGGAGATCTGTACTGTAATGTGGCTGCTAAGGAAGTACTTTGCAATGTTTCTGTTGATGAACCAAAGTTGTCTGGGCATGGTACATGCACTGACACTGCACATGTCTCCATAATGAGTGAAAGGTCACAGGTCATGGGTTGTGGCTCTTCTGATGTGATTTTGAAGCAGAATGACAGTGCCAATCAAATTGAAATATCCATGTCCTCAAATCACCAACAGGATGGGAGCATCCTGCTCACCCATGCAGAGAACTGTGTGACTTCAGAGGGGTTAGAATCAGATCAGCCAAATCTTTCTGACTGTTTGGTTCAGCAATTACAAGAGTCCATTCCAACAGACCATAAACTCTCACAGATTCAGATTTGCCTGAACAACACACCGGATATTGTGAATGAGGAGGAGAGGCAGGAGATGAATGCAGAGGCTCTCAGTGCTGTTGAAGTGAAAGATTTGATTGATGTAGGTATTTTAATGCAGCCAGACATGGAGGATACCTGGCTGGTTGTAAGCGAGATAGACGGACAACCTGAGCATGCCGAGATGGAAGTTAGCGACGAGTCTCTGGTGCAGTGCCCTGAATCCCAGTCAACTGTTGCTGTATATGAATGCACAGTGCCCTGCTTTACATCAGCTGCCATTCACAGTGATGTTAAGCTGCTGTTAACTGACAAAGAAGAGGAACCAATGGAAACATTGACGCAAGACTTGCAAGTCCAGAGTAATCTAGGGTCTCATCCAGCTACACTCAAATCCACAAAGGAATTAACCATTATGTCCTCTGCTCAAAAAGAGGTAGCTGCAATCGTCAAACAAAATAATGATTCAAGTCCCACTCTTGCAAAAACGATGACAGGGTTAACCTCAACACTGCTGGATGTCACACTTGATTCTGTGCATGATCAGCAAGAATCTGTTGTGGTGGAAAATACCCCAGGTGTGTCATTAATTTCACTGGGCACGATTGACCCAAAGCTACTGATTTTAAAGAAGGATGACAGGCCTGCCCTTAAGCAACCTTCTTCCCTGTCTGCTAGGGTCGCAACCAAGCAGAACTCATCTATCCTGGATAGATCTCCTAGTAATGAATCGAACAAAGTTTCAGAGTGCCTTGCTAAAACTGATACAGCTGCATCCTCCAACTTAAAGGATGTTAAGTTACCTGCTGACCACCCTGTGTCTAACACTCTTTCTCAATCCTGGACTGTTTCCACTTCTAATGTACTTTCACAGAACAGTTCTGAGAAAGAAAAGTTATATCAGTCAAGTAGTTCTGGCAAGATGCTTCAAAAGGAATCCTCTGCTGACACTTCTTTATCAACTTCAGTGAAACTCCATAACTCAGAAAGCCACCTTACTCCATCTCCTGGAGGTGTCTGGGGTCCTGTGTCTGATATTGTCCCCTTGGAGAATCAGTCTTTAGATGGCAAACCACTCCAAGATTTAATGTCTTTAGGGGGCGCCCTGGTTTTGGAGCAGCAACAGTTACCGGACAAACTTTTGTCAACAGCGCAAGATTCTCAGCACACCATCCTGGAGCCCCTGGATGCTTCTGTGGAAGAAAGCAGCGACGGAGAGGCTGATAGTTCTTTAGAGGTCCAAAATGAGGACAGTAATGCTGTGACCAATCCAGCAGAGAATAAGGTTTGCCAGTGGATTGCAGGCAAGGTTACAGCAGCCTCAACTCCTTCCACCTCCCCTGTTCCATGTTCATCTCCGTCTCCCTCATCTAGTGACTGGATTCGTTCTCATACAGGCAGAGCCTCACCTATACGCAACTCTCATGGCAAAAACATGCCCTCCACTTCCTCCCAGGGTTCCCAGTCAGAGCAGACAACCACACCAAAATCAACCCCAAAGCATACAGACTTGGCAGAACTGGCAAAGCATGAAGCAGAAATAGAACATCGGACTCTTGCACTAAAACGTGAAGGTTTTTGGTCTCTGAAACGTCTGTCTCGTATAACGGAACCAGTACGGCCTAAAGATCACTGGGATTACCTCTGTGAGGAAATGCAGTGGCTCTCCGCAGACTTTGCACAAGAAAGGCGATGGAAAAGAGGAGTTGCACGAAAGGTAGTCCGAATGGTCATGCGACACCATGAggagttgaggcagaaggaagaGAGAGCAAAACGTGAGGAGCAAGCCAAACTGAGAAGAGTTGCTTCTTCTATTGCCAAGGAGGTCCGTGCCTTCTGGAGCAGCGTTGAAAAGGTGGTCCAATATAAACAACAGTCCAGACTGGAGGAGAAGCGGAAGAAGGCTCTAGATCTTCAGCTGGATTTCATTGTGGGTCAGACAGAGCGTTACTCAGACTTGTTAAGTCAGTCCCTGCAGGGCGCCCCTGTACAGAGTTCAGACATTGCAGCTGCCTCCAAACAGTCACAGCCTAATCCTGTTGATGAGGATGATAGAGACTTTGAGCCCCCTTGTGAGGAAGAGGATGACGAAGAGACTATAGAAGTTGAGGAGCAACAAGAGGGGAATGATGCAGAAACACAGAAGCGAGAGATTGAGTTACTGAGGGAGGAGAGCACACTGCCTCTTGACCAGCTACTCAGTACTTTAACTCTTCCCCAGGATGTTGAATCAGAGGAGGAGGAGTCCGATACCTCATCTTTAACAGTTGAAGATGAAGACAAAGAATTCAGTGCCAATGAAGAAGATGCGGAAGATGAAGAAGAAACCATTGAAGCCCAGGAAGTTATTGAAGGCGAGGGAGACCATACAGAGGAACTGGATGACCTTGCTAGAGAGGGGGAGATGAGCATGGAAGAGCTCCTAGAGAAATACAGAGGAGCGTATGCCTCTGATTTTGAGGAGCCTTCAGCATCAGCAGACTCCTCAGAGGAGTCAGAAGGAACTGAAGTGGAAGCAGAGGAAGAGACAGAGGGAGAAGACAGTGCTGATGATAGTGGCTCCTCATCAGATTCTCAAGCAGCTGTAGATACTGAGGAAGAAGATGAGCATGAGGATGTGCAGGAGagtgatgatgaggatgatggagGAGAAGGAATGGAGGTTTTGCTAAGAGAGGGTGATCAGAGTCCTTCTGTACCAACATCTCCTCGGCCTAAGAAAGAAATCAGCCATATTGCTGCTACTGCTGAAAGCCTTCAACCTAAAGGATATACACTGGCAACAACAAAGgTCAAAACACCTATTCCGTTCCTGCTTCATGGTACCTTGCGTGAGTACCAGCACATTGGACTGGACTGGTTGGTCACTATGAATGAGAAGAAACTCAATGGCATACTTGCAGATGAAATGGGGCTTGGCAAAACCATTCAGACTATTGCTCTGTTAGCTCATCTAGCATGTGTAAAGGGTAACTGGGGTCCACATCTGATCATTGTGCCAACTAGTGTAATGCTCAATTGGGAGATGGAATTGAAGCGCTGGTGCCCAGGATTCAAAATCCTCACCTATTATGGCAGCCAGAAGGAGCGCAAGCTGAAGAGACAAGGCTGGACCAAACCCAATGCTTTCCATGTGTGCATCACCTCATATAAGCTAGTACTGCAAGATCATCAGGCTTTTAGACGCAAGTCTTGGAGGTACCTCATTTTGGATGAAGCCCAGAACATCAAGAACTTTAAGTCCCAGCGCTGGCAAAGCCTGCTCAATTTTAACAGTCAAAGGCGGTTGTTGCTCACAGGAACCCCTCTCCAGAACAGCCTAATGGAGCTGTGGTCTCTTATGCACTTCCTCATGCCACATGTGTTCCAGTCTCATCGTGAGTTTAAGGAGTGGTTCTCAAACCCGCTCACTGGCATGATTGAAGGGAGCCAGGAGTATAACGAGGGCTTGGTCAAACGACTTCACAAGGTACTAAGACCTTTTTTGCTGCGAAGAATTAAAGCAGATGTGGAGAAACAAATGCCTAAAAAATATGAGCATGTTGTGCGCTGTCGACTCTCCAAAAGACAGCGCTTTCTTTATGATGACTTCATGGCTCAGGCCTCGACACGAGAGACTTTAGCCAGCGGTCATTTCATGTCTGTGATCAACATCCTGATGCAGCTGCGGAAAGTGTGTAATCACCCCAACCTGTTTGATCCAAGGCCCATACAGTCTCCTTTTATCACAAAGGACATCATCTATTCTACTGCATCACTGGTTCAGCAGGCTCTTGAGACCTCACCTTTTGAGCGCTGTGACTTGTCCATGTTTGACCTGGTTGGCCTGGAGCACCGTGTGTCAAGATACCAGGCAGATGTTTTCCTGCCCCAGAGGAAAGTGACGCATCAACTTATTCAGGAAATCATGGAGTCCCCTGATCCTCCTCCCAGACCTAAGCCCGTTCGCATGAAGGTCAACAGGATGCTCCAACCTCTTCCTAAGACTGATGGGCGTTCAGCAGCAAACAGCCCTCGTCCTGCAtgcccccccaccaccaccacgaTTCAGACTCCAAAGCCTCTAATCACAGAGGTGACCACTTCCCAAGCTCCCTCCCAGCCAGCAACTCAAGTTTGTCCTGTTACTCCTGTCACTGCATTAAGAGCCCCCCTGGCTCCTAGTACCATCCCTTCTGCACCTGCAGTCAGGCCACCAGCCCCCCAGTCAGTGACTGTACGCCCCTCTGCACCATCCACCATCACAGCTGCTCCTCCTCCTCAACCTCAGCCTCCTCAACCAAGCAGCATCATGACTCAGAGGGTCCTGCTCAGCCCAGATATGCAGGCTCGTTTGCCATCTGGTGAAGTGGTGAGTATTGCCCAGCTGGCCTCCCTGGCTGGCCGACCGGTATCATCCTCTCAAGGCAGTAAACCAGTCACCTTTCAGCTACAGGGCAACAAGCTCACACTCTCTGGGACGCCGCTGCACCAGGTTCCTGTCCCTCAGCCACGGCCCATTCAAGGAAATGTAATGCATCTGGTTTCCAGTAGTGGGCAGCACCACCTTATTAGTCAGCCAGCTCAGGTGGCAGTTCTTCAcacagttagtcagtcagttagcAGCTCAGCAAATCCCCACCCAGCCAGCACAACCCCAACCTGCTCTGGACTAGCAGTACCTTTCACCACTGCTCAAGTCGCAACATCCATGGTAGGTGGACCTGGAATTGTAAAGATTGTTGTACGCCAGGCACCAAGTAAAGAAGGCGGGTCAATCCCTACCCTGGCTGTGCCTCCTTCTCCTCGTCCTGCTCCTCCTCAATCGGTCACACTTCATCCACATGGCTCTCCAAGCCCTGTTCTTAGAGCGCCCACTGCTTCACAGCTTCCACAACGGCCTCCGGTTTATGCTGCTCCGCCCAGAACTGTTGCTTCCTCCCAGACCCCACCAGCTCGCCCTGTGTTGAGAGTACTACAAggaccaccaccaccaccagccccAGAACCACCAGTAACAAAGGCAAATACCCCATGTGAGGACAGTAATGAAGTGATTACTTTGCGAATGAGCACTCCTAAACCTACATCCTCATCACAGAGCAGTAGTTCAGCATCTCACCGTCCCCGCATTCAGCCGCCAGCTCCACCACGTTCCCCCTTCTACATGTCCTGGCTTGCAGACACCCGGAAGGCTCAACGAGATGACCGAATTTCTCAAATCATGCGCATCAATGAGCTGCACTGCACTGCTAAGCCTGTGTATGGCCGTGAGGTGCTGGACTTTTTAACCTTCCTCCCAGGCCCTTGTCCATCTCCAGCACGTCCGGTTGTAAACAACTGGAGTTACTCTGGTTATAGCTCCTGTCTGATTGCTCAGTCACAACATACCAGCAACATTCTAGAAAGGAATACATTTTTGAGGGAAGAGATTCATAACTCAGAGGAGAGGCTTCGGCTTCTCTCTGATGTCATAGACAGGTTCGTTTTTGTTATTCCTCCAGTGGAGGCAAGACCTGTCACCATGCACAGCTGCCACCCACCACCCTCCCTCAGACACCAGCAAGCTGTTTTCTCCTCTGATCTATCCTCTTATGTCTCtccacttacacacacactccatcGAATCCAGAGCAACATGAGGACATACTTCCCTGACTTGAGGCTTATTCAGTATGACTCTGGTAAGCTGCAGACACTCCACCTCCTGCTTAGAAGGTTGAAAGCAGAAGGGCACAGAGTCCTCATATTTACTCAGATGACACGTATGCTAGATGTACTTGAGCAGTTCTTGAACTACCATGGACACATCTATCTGAGGTTGGATGGAAGTACACGAGTGGAACAGAGACAGGCTCTGATGGACCGCTTCAATGCAGACCGTCGAATTTTTTGCTTCATCCTTTCCACCCGCAGTGGAGGTGTAGGTGTTAACCTGACTGGGGCAGATACTGTTGTGTTCTATGACAGTGATTGGAACCCAACCATGGATGCCCAAGCTCAGGACCGGTGCCACAGAATTGGACAGACGAGAGATGTCCACATCTATAGacTGATCAGCGAACGCACAGTGGAagaaaatattcttaaaaaagcCAATCAAAAGAGGATGCTGGGAGATATGGCTATTGAAGGCGGAAACTTTACCACTGCCTTTTTCAAGCAGCAAACTATTAGAGAGTTGTTTGATGTGACAGAGGGAGAAAAGAAAGAAGCTGAACAGAGTGTGCCTCAGTCAGATGATGAGGAGTCCATCAATAAACAAAAAACCACCATTTTGGAACAGgCCCTGTGTCGTGCTGAAGATGAAGAGGACATAGTGGCTGCATCTCAAGCAAAGGCAGAGCAGGTGGCTGAGCTTGCAGAGTTTAACGAGAATATACCTCTAGATGACGGTGACAGTAGAGACCAAGAAGAGGAAGAGCTTTCCAAGGCGGAGCAGGAAATTGCTGCCCTAGTTGAACAGCTCACTCCCATTGAGCGTTATGCCATGAATTTTCTTGAGGCTTCCCTCGAAGATATTTGCAAAGAGGAGTTGAAGCAGGCAGAGGAGCAGGTTGAGGCTGCAAGGAAAGGTTTGGACCAGGCAAAAGAAGAAGGTTTGAAATTGCATCAATCATCTGACAGTGATGAAGAGGATTCTGTACATCCCAGTACAGATGAGCCTACTCCATCCCGTCGCCCTCGCAAACACAAAGAGAAAGGTGCTCCTTCTACAAGGGTCAGTGGTAGGCTCAGAGGGACACCTGCTGACGATATATCTCTAACGCAGACATCCCCAGATAGAGGCCGGAGGACGGCATGGTTGAACTCTGAGCGCAGCATAAGCCAAACCCCTGGGTCCACACAAAAGTCTCCCCTAAACAGAGAAGTGCCTGAGAAGCTTCGCAGTGGCCCACGAGGGCGATGTACAACCAAAGAATCTGCGTCATTAGAGAACCAGACTATCCCAACCAACCAGCAGCTTATAGATTCAACAACCTTGTCCCCTGCTATGCGGGATTCATACCCAAAAATTAGTGTGCCATCCCCTCACCAACAGTCCATCTCCCCATCAAGCTCTGTGCCTTCAGCTGCTGCATCTCCCTCATTGGACAGAAACTCTTGTGGCCATCTGTCTTCCTCTACTGTTGCATGCAGAGAGGACAGTGAAGACCAAAAGGGAGAAGCACGGTCTGAAAATGTACAGAGCAGAGATCGGAGAGCCTCTGCATCATCAGACTCCATCTGTTCTCCAGAACATCACTCTGAACAGGAGTGTcagctctctctttctcccacTCTAGCATCACCTAACTCTCGCTCACCACGAAAGCGGCAGTCTGCTGAATGGGAAATTCTCAAGGGACTTCCAGAAGATTCTCCCTCAGCCAAGGTCCTTCGAAAGCTTCCAGGTCGTCTGGTCACTGTGGTGGAGGAGAAAGAGCCAAAGCGGAGACGGAGAGGTGTGAGTGGGAGTGGAGGATTGCATGAAGGTTCATCAGAGGAGCCTGAAAAGACTGAGCCAGTTCAAGACACAGTCCCTCATTCATCTGATGGATCAACTCAAACTTTTAAAGTCTCTCCTCCCAAATCTGTTCTCACATCCTTACAATCTTCCCCACCACCAACACCACGAGAGCAGGAACAGACCTCTTCGCCATTACCTTATAGTTGTATAGGTCGAGGACACAACCCCTGTTCTCCAACACATCATTCCCCAGATATGCCTGTCTTGCGGAACTTACCAGTACGCCGAAGGCTAGAAACAGAGTCCCGATTGGCTGCACAGTTAGGAGAGCAATTTTTAGGGAGAGGTAGAGGAGTGGATCGAAAATCTGCATCAACTCAGAAAAGAATAGAAACAAGCACTGACAAGGACGGTTCTGCTCCATGTGACTCCAGTCTTATGTCGAGGCGGAAAAGGGGCAGGCCACCGAAAACACCCCCAAGAGCACTGGAGTTGTCAGAAGAAAACACACCTGTAATTGAGAAAACAAGTCCTGAGCGGAGCCCCCCTCACTCACCAAAACGGAAAAGGGGACGTCCTCGTAAAGATTCCACCACAACTACAGGCTCACCCCCATCTTCACCCTCTGCTGGTGCTCCTTCATCCCAAGAGCCTAATTTGTCAAGGTCTAATGTCATGCCTGAGACTTTGCCTACTGACAGTAAAATTTCACCAATAAGCTCTCCAACACTCTGCCCCACTTCACCcttaaatgctgctgaagtgtcCTCACTTCCAAAACCAGATTCTGAAATAATTCAGACCACTACATCGGTTTTACTGTCCACATCTCCATCAGAAACTGGTGTAGACTCGCATGGTGATACTTACGCCAGTCTGAACACCATAAGTTCATGCAATGACTCTGACAACAGTACACTTGTATCTTTACCACACAGCACCTCTACAGCAGCACCATATGAAACTTGTACTGATTCTTCTCCTACACTACAGTTTACATATTCTTTCAGAGAGCCTCCAGTTACTACTGTTTCAATCTGTGCTGAGGAAATTGCCCACACGTCTGTACTTTCTGATGCCAGTGAAATCACTGCTTATTCAGAATCTTTAACTGTCTCAACGGCTGCAGTAGAAGCCGAGGAAAATTCAGTCACGGATAATCAGCAAGTAAATAATTTGCAGCCTTCAAATACATCGACTCAAGTCACTTCACAATGCGTAGATGAAACCGATCCAACTACAGACCTGCCACAAACCACTTTAGAGCCAATATACAGTGTAGCTGAATCTTCTACTCCCACTGATCAGCCATCCATCCAACCTAGTTCTCCACCTGCTTTGACTTCTGAAATTGAACCTGAAGCATCTTCATCTATATTGGAGGCACCAGAAACATCTGCTGTACAGACTGTGTCAACAGTTCAAAGATCTTTACCTCAGTCTGAGCAAATTTCTCCTCCGTCACAACTTCAAACTACAGCAATGGAAGCAGTGTCAGATTCACCATCACAGCAAATATCTTCATCATCTTTACAGTCTCTATCTGCCACTAATCCAGTAACAACAGATTCTTTGTCCACACTGAGTACAGATGCAGATTCTTCTCAATCCCAAAACATTGTGGTTGAGACCATGATTGATAATCATGAAGGCCCACATTCACCCAAGGAGAAAGTTGAAACTGAGGAGGAGGAAGTTTTAACTGAGGAAGAGGTTGTTACTGAGGAGGAGGAACAGGAGGTTGTAACAGAGACAGAGGTTGTAACAGAGACAGAGAAAATGGAAACAGACAGTGTTGGTGAGGATGATGCAGGAGAAAAAGATGACATCTTATCTCAGCCAAAAAAGAGAAGACTGGAATGTTTGCCAAAGGATCAGACACCTAGTGCCTCAGGAGTTGCCTCATCAGATATTGAGAGTCATGATGTTCAGAAAAGTGATGGTCCTGATAAGCCATTAGAAGAGGAAGAACCAGAAGACAAAGAACCCAGATCTTCTATCAGAACACGAAGCATTAGTAGACAAAGCAGCCAGGAGACAGTCCGTTCCTCTTCACCATCTTCTGTATCCTCATGTGGTACAAGATCATCTCGGTCAAAGAAGGGTGCAGAGAACAAGAACCCCGTAAAAAGGAAACGGAGTGAAATAAAGTCTGAAAAAAAGAAGTCTAAAGAGGGCTCTGACAAAAAGCACCAATCCAACTCTTCCTCCTCATCTTCAGACTCTGAGGACTCTAATAGTGTGAAAAGATGTCTGACAAGATCAGCTCAAAAGAAGTTGGAGAAAGAGGGCATGATTGCTAAAAATGATGAGAGCAGTACGAGGCAAAAAGCAAGGTCTGACAAGAAGGCTAAATCCACCAATTCCACGGAAGGGGAGTCCAGCGGTGAAGTATGTTCAAGAGTAACCCGGAAATCTACAGGCCCACAGTCAAATACTTTAGCCTCCCCAGAACCTGAGGTACTGGGCAAACGCTGCTCGGCCCTTAATGCTGCTGCCAAGCTCTTGGCAATGAGGGCGAGAGGCCCCGACACACCCAGTTCCAGCCCCAAAAATAAGACTGCTGCacatcaaagcaaaacattaacATCTGAAAAAGTTAGTAAACCCAAGGTTAATCCAGGACAGGACTCTCCCAAGGTTTCTAACAATAAAGCAGAGAGTGGCAAGCAACCCCTCGGTCAGTCAACTGAATCACCACAGTCCTCTTCTTCTGCTCGATCAACTCGGCAGCGACCAGGCAGCCTGGTCCCCCCCTTGGAAGTGGAAAGggtaaaaaaggaagaaaagaaaaagccATCTGATCAGAAGGAAGAAGGTGAAGATGAAATTAGAGAGACCAGGTCTTCGAGAGGTCATAGTGCCTGcagtagtataagcagtgaaagAGGAGTGGGCAGCAGCAGAAGTCGGAGTAGCAGCAACAGTAGCCAGCGCACCCACAGTCTGAGCTCACAAAGTACAGACCCCATACGCACCCGATCCAGAGCCACTTCCTCTGGTAGTGATACAGAAAGAAGCAAAAGTATTCAGAGGAAAAACGATGGAGGCCGAGGCAGGGAGAGCAGAAAAGAGAACAAGTCCCAGAAGCTTGACAAAGCTGAGCTGAGTGCTGGATCTGGTGACGGGACTCCAGACAGGGTTCTCAGGAGTGTTGCTGCACTGGCAGCTGCTCATGCACTTACTCCAGCTTGTAACACACGATCCTCAACCTCCCAAAAACGGCACTCCAAGACGTGATGGGGATTGGAGAAGTtgcatttagatttaaaaataagttagatCAGAATTTCAGAGAGGAGAGAATGTCTATTTTATGGAGGAAAGGGAATCAAATTCATTAAAGGCCATGATTTGGCTGTATGAGCGAAGACAGGAAAAGAAGATCTGTTGCACATTGTGATTAGATCTAACTTCGCTTTTGCCCTCACAGCTCTGTAAAGGCAAGCCATTTATAATGTGGAAAGGGTGTGTAGATGCTGGACAATGATGAAGATTTGgtcatgtatttaaaaatgttctaaTAATTTGGATAATATTTTACGTTGCCACAAAGACTTTGGAACTTCAAAGTAGCTGGGCGAGAGGCAAgattcattgtttgttcacacTATGTACTGTAATCAAAGACTGAAAGACTGGAAATACTATGTGAAATATGTTAGAAGATTGGTCACATAGACTGTACACTTTTTACAGAGTTTACTAGTGCTGCAAATGGTATTGATGAGTAAGACGTTCATTAATGCTACATTGAAATGATTTAGTGGGGATTGTACAATTGTAAAGTTTTTAGACTGTTGCGTTCAGGATTATGTTTGTCAGCTGTTTTGATGATTGTTTGTTTCAAGCCAGTtgataaatcacaaaaatacctTTGATATCTTCCAGGGTATGAAGAAAAGGACAGGTCTAAAAAATATTTCTCTGCACTATGCTGGAGTTACTATTTGCTTAGGTCACCTGTCTTGTATAACGTTTCAGTCAATTACTTTTAAATTCTGCTGCTGCCTGCTTTTTTCACTTTTGCACATCTGAAATGTCTAAGACATTGATGAATGCAttgtgatttagttttttttttctccttcaaaCATCAACTTGTCAGTACATCCTTACTGGTACCTCACTGCATTTTGTAAGCTCTAAAGTATGTGTATCTCTTGAGCTTGTGATGAATCTTGATATTTGCTTGTCATTTGCTTTATAGCAGTACAGAAATGGGAGACAACATCTTGCTATTTTTCTTATCTCTTTCCCAAAGTGTTAATCATTATGATCATCTTTACACATTAAGTCGTATTCTCAACAGAATCTAAATGAGTTTGACAAAATGAGAGTGCCTGTTGATCCATACAAGGATCCATGTTAACGTATAGAAGTTTGCTCATCTGTAGTGCTTTAAATGTAATAAGCTCTTCCACCCTTCATTGTAACAGCGACATTTTTGTTTGTGCAACCCAAACTGAAGTCAGTTCTCTGGTTAAAAAATTGTCAGTTCTCCCATCTTTCACCCGATTCCCCCCGGCTCTTTTGGAGTATTGGCCCGTTTTACGAAGGGACAGATGCTGAGTGCATAAGATACACCTGTAAGAActtcttaagaaaaaaaatgtctactttttatttgtattttttggctCAATATTGGCCGTCAGGTGAGATGTAAAATAGCTTTCTTTGCCCTTGTTGGACAGAAAGATGTTTGGGGGGTATTTAGTAGAACATGGTGAtggtcttatttttattttgatttgtgtCTATTCTAATTTGTTACATTCCTTATGTTCTCTTGTAATTCCACATTGTTTTACTTGAAAGATTGAAACAAATGTAAGTTGAATAAAAAGACCAAAAATA

Function

GO:

id name namespace
GO:0006338 chromatin remodeling biological_process
GO:0016458 gene silencing biological_process
GO:0043044 ATP-dependent chromatin remodeling biological_process
GO:0043486 histone exchange biological_process
GO:0019752 carboxylic acid metabolic process biological_process
GO:0000812 Swr1 complex cellular_component
GO:0042393 histone binding molecular_function
GO:0005524 ATP binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer molecular_function
GO:0016887 ATPase activity molecular_function

KEGG:

id description
ko03036 Chromosome and associated proteins

ZFIN:

id description
ZDB-GENE-041008-127 Predicted to enable ATP hydrolysis activity and histone binding activity. Predicted to be involved in histone exchange. Predicted to act upstream of or within carboxylic acid metabolic process. Predicted to be part of Swr1 complex. Human ortholog(s) of this gene implicated in Floating-Harbor syndrome. Orthologous to human SRCAP (Snf2 related CREBBP activator protein).

Ensembl:

ensembl_id ENSDART00000153426

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00009402 lncRNA upstream 165104 26894321 ~ 26896616 (+) True XLOC_004754
TCONS_00010944 lncRNA upstream 227528 26737431 ~ 26834192 (+) True XLOC_004752
TCONS_00010943 lncRNA upstream 335939 26638127 ~ 26725781 (+) False XLOC_004750
TCONS_00010743 lncRNA upstream 369669 26691819 ~ 26692051 (+) True XLOC_004751
TCONS_00010941 lncRNA upstream 468422 26589644 ~ 26593298 (+) True XLOC_004748
TCONS_00009425 lncRNA downstream 121474 27213760 ~ 27229858 (+) False XLOC_004765
TCONS_00009431 lncRNA downstream 139458 27231744 ~ 27232651 (+) False XLOC_004766
TCONS_00010945 lncRNA downstream 1284744 28377030 ~ 28381255 (+) True XLOC_004777
TCONS_00010744 lncRNA downstream 1525415 28617701 ~ 28617965 (+) True XLOC_004779
TCONS_00009458 lncRNA downstream 1841238 28933524 ~ 28946150 (+) False XLOC_004786
TCONS_00009409 mRNA upstream 384 27034760 ~ 27061336 (+) False XLOC_004756
TCONS_00009408 mRNA upstream 914 27034760 ~ 27060806 (+) False XLOC_004756
TCONS_00009407 mRNA upstream 1591 27034594 ~ 27060129 (+) False XLOC_004756
TCONS_00009410 mRNA upstream 2728 27055900 ~ 27058992 (+) True XLOC_004756
TCONS_00009404 mRNA upstream 32912 27021979 ~ 27028808 (+) False XLOC_004755
TCONS_00009413 mRNA downstream 4549 27096835 ~ 27115412 (+) False XLOC_004758
TCONS_00009414 mRNA downstream 7657 27099943 ~ 27114838 (+) False XLOC_004758
TCONS_00009415 mRNA downstream 21913 27114199 ~ 27114734 (+) True XLOC_004758
TCONS_00009416 mRNA downstream 25323 27117609 ~ 27120171 (+) True XLOC_004759
TCONS_00009417 mRNA downstream 34853 27127139 ~ 27128768 (+) True XLOC_004760
TCONS_00009383 other upstream 1413477 25648127 ~ 25648243 (+) True XLOC_004738
TCONS_00009380 other upstream 1583814 25468312 ~ 25477906 (+) True XLOC_004734
TCONS_00009372 other upstream 1809933 25223799 ~ 25251787 (+) False XLOC_004732
TCONS_00009364 other upstream 2496128 24565478 ~ 24565592 (+) True XLOC_004724
TCONS_00009361 other upstream 2643380 24418224 ~ 24418340 (+) True XLOC_004723
TCONS_00009419 other downstream 42583 27134869 ~ 27134967 (+) True XLOC_004762
TCONS_00009421 other downstream 64657 27156943 ~ 27163064 (+) False XLOC_004764
TCONS_00009426 other downstream 126707 27218993 ~ 27220589 (+) True XLOC_004765
TCONS_00009428 other downstream 139009 27231295 ~ 27234421 (+) False XLOC_004766
TCONS_00009459 other downstream 1853246 28945532 ~ 28945646 (+) True XLOC_004786

Expression Profile

//

Homologous

species RNA id representative length rna type GC content exon number chromosome id location
grasscarp (Ctenopharyngodon idella) CI01000063_06293923_06317422.mRNA True 13792 mRNA 0.48 35 CI01000063 6293923 ~ 6319073 (+)