RNA id: TU151092


Basic Information

Item Value
RNA id TU151092
length 358
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G102209
representative True

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 25751779 ~ 25752136 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTGGCTGTCTCCCAAACAACATGTAATAAGGAGAGTAACCAGTGGAGGAATGTGGGGTCACATTGTAGGCGTACACCAGCTCGGGTAAGTACTCTGGCCATCTCCGCTTCTTCTCTGGAGGTAAGGAACGCAAGAGGTCGTGCAGAGTTCTGTTAAACCTCtcacattgtgcattccctGAGGGTGATGTGGTGTAGTGCGGGACTTTCTCACTCCATATAGTTTACAAAGCTCTGCAATCACAGCACTCTCAAAGTTTCTTCCCTGATCTGAATGAAGACGCTGGGGCACTCCATATTTGAGAAACCATTCCTTTAGAAGGATCCTAGCAGTAGTGTCCGCCTTCTGATTGCGAGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252469.1 lncRNA upstream 30851 25717393 ~ 25720928 (+) True LOC122357405
TU151013 lncRNA upstream 58309 25144538 ~ 25693470 (+) True G102143
XR_006252536.1 lncRNA upstream 221408 25516342 ~ 25530371 (+) True LOC122357820
TU151048 lncRNA upstream 249633 25466320 ~ 25502146 (+) False G102168
TU151047 lncRNA upstream 283477 25466320 ~ 25468302 (+) True G102168
TU151095 lncRNA downstream 5039 25757175 ~ 25757493 (+) True G102212
TU151191 lncRNA downstream 47069 25799205 ~ 25800191 (+) True G102284
TU151194 lncRNA downstream 51476 25803612 ~ 25894303 (+) True G102286
XR_006252553.1 lncRNA downstream 78079 25830215 ~ 25831944 (+) False LOC122357999
TU151202 lncRNA downstream 78103 25830239 ~ 25832245 (+) True LOC122357999
XM_043256869.1 mRNA upstream 642212 25092111 ~ 25109567 (+) True csnk1a1
XM_043256871.1 mRNA upstream 642212 25092111 ~ 25109567 (+) False csnk1a1
XM_043256872.1 mRNA upstream 642212 25092112 ~ 25109567 (+) False csnk1a1
XM_043256870.1 mRNA upstream 647349 25092111 ~ 25104430 (+) False csnk1a1
XM_043257885.1 mRNA upstream 665220 25083848 ~ 25086559 (+) True sil1
XM_043257697.1 mRNA downstream 85655 25837791 ~ 25841644 (+) True LOC122357986
XM_043257682.1 mRNA downstream 137936 25890072 ~ 25897581 (+) True LOC122357974
XM_043257710.1 mRNA downstream 146980 25899116 ~ 25917595 (+) True xrcc1
XM_043257684.1 mRNA downstream 167130 25919266 ~ 25936250 (+) True drd2l
XM_043257687.1 mRNA downstream 184498 25936634 ~ 25944086 (+) True LOC122357978
unassigned_transcript_1961 other upstream 1523531 24228177 ~ 24228248 (+) True trnae-uuc_32
TU150835 other upstream 1535016 24216243 ~ 24216763 (+) True G102017
TU150815 other upstream 1662257 24086724 ~ 24089522 (+) True tmem35
unassigned_transcript_1960 other upstream 1700004 24051703 ~ 24051775 (+) True trnav-uac_6
XR_006252530.1 other upstream 3444328 22282292 ~ 22307451 (+) False gria2b
TU151254 other downstream 280843 26032979 ~ 26035638 (+) True G102332
TU151318 other downstream 416422 26168558 ~ 26171402 (+) False gnrhr3
XR_006252567.1 other downstream 622197 26374333 ~ 26383634 (+) False khdc4

Expression Profile