RNA id: TU343769


Basic Information

Item Value
RNA id TU343769
length 245
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G302634
representative True

Chromosome Information

Item Value
chromosome id CI01000091
NCBI id null
chromosome length 1322612
location 333688 ~ 333932 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGGAAGGAGATCAGGACGTGACCCAGCCCAGGTCAGTGTTGCCAGATGTATGATAATTATCGTATTTGTACGATAATTTTGACCTCTGTACGATGTACGATCAATAATGAAAAAAATCCCATAATGTACGATAATTTCAGAATTTTGTGACACTTCAAATGATGGTCGTTATAATCGGCTTATACTCATTGATCTAGCTCTATCGTGATTGTAAGGAGAACGTGAACGTTGTTAGGCATGTCTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU343766 lncRNA upstream 25536 307932 ~ 308152 (+) True G302631
TU343735 lncRNA upstream 63993 269406 ~ 269695 (+) True G302611
TU343733 lncRNA upstream 68559 264926 ~ 265129 (+) True G302609
TU343727 lncRNA upstream 77040 256130 ~ 256648 (+) True G302603
TU343725 lncRNA upstream 80022 253367 ~ 253666 (+) True G302601
TU343771 lncRNA downstream 593 334525 ~ 335090 (+) True G302636
TU343765 lncRNA downstream 10316 344248 ~ 346973 (+) True G302630
TU343788 lncRNA downstream 59754 393686 ~ 393891 (+) True G302653
TU343816 lncRNA downstream 257161 591093 ~ 591568 (+) True G302680
TU343824 lncRNA downstream 279282 613214 ~ 613703 (+) True G302688
CI01000091_00309199_00325636.mRNA mRNA upstream 7817 308968 ~ 325871 (+) True CI01000091_00309199_00325636
CI01000091_00277114_00290224.mRNA mRNA upstream 43464 277114 ~ 290224 (+) True CI01000091_00277114_00290224
CI01000091_00247680_00252574.mRNA mRNA upstream 80959 246921 ~ 252729 (+) True CI01000091_00247680_00252574
CI01000091_00192431_00197288.mRNA mRNA upstream 136220 192431 ~ 197468 (+) False CI01000091_00192431_00197288
CI01000091_00161029_00165225.mRNA mRNA upstream 168206 160989 ~ 165482 (+) True CI01000091_00161029_00165225
CI01000091_00359388_00360200.mRNA mRNA downstream 24657 358589 ~ 360617 (+) True CI01000091_00359388_00360200
CI01000091_00366037_00366669.mRNA mRNA downstream 32105 366037 ~ 367204 (+) True CI01000091_00366037_00366669
CI01000091_00368135_00368878.mRNA mRNA downstream 34203 368135 ~ 368939 (+) True CI01000091_00368135_00368878
CI01000091_00370016_00370645.mRNA mRNA downstream 35048 368980 ~ 371044 (+) True CI01000091_00370016_00370645
CI01000091_00375689_00376318.mRNA mRNA downstream 41475 375407 ~ 376639 (+) True CI01000091_00375689_00376318
TU343606 other upstream 271521 59635 ~ 62167 (+) True G302512
TU343815 other downstream 252980 586912 ~ 589526 (+) True G302679
TU343910 other downstream 621978 955910 ~ 957032 (+) True G302768
TU344339 other downstream 718691 1052623 ~ 1053014 (+) True G303132

Expression Profile