GENE ID: ENSDARG00000056027

Symbol Location Gene type Genome version Species
hoxb8a 3: 23687909 ~ 23690481 (+) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000056027 (hoxb8a), yellow represents other genes.
  • Hover over the node can see the symbol/gene ID it represents.
  • The more connections, the bigger symbol size.


    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Epidermal cells (cluster: 16)
    		 potential marker
    		 NA
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Endothelium (cluster: 5)
    		 potential marker
    		 NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Neuroblast (cluster: 10)
    Somites (cluster: 11)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone Neuron (cluster: 13)
    Satellite glia (cluster: 16)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT Epidermal cells (cluster: 12)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 7)
    		 potential marker
    		 NA
    GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT Epidermal cells (cluster: 11)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 4)
    		 potential marker
    		 NA
    GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT Epidermal cells (cluster: 10)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 8)
    		 potential marker
    		 NA
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT Epidermal cells (cluster: 13)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 10)
    Epidermal cells (cluster: 12)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 12)
    Epidermal cells (cluster: 14)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
    PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
    PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development
    PRJNA706197 (14hpf) embryo baseline 14hpf, FACS sorted sox10:nEOS cells
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
    GSE158142 (2dpf) head baseline 2dpf, untreatment
    GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment
    GSE158142 (3dpf) head baseline 3dpf, untreatment
    GSE158142 (24hpf) head baseline 24hpf, untreatment
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver
    GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS
    GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS
    GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated
    GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA
    GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS
    GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated
    GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
    GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA
    GSE150498 (DSS treated) intestine disease 6dpf, DSS treated
    GSE123241 (wild type) neuromast baseline 5dpf, wild type during sensory hair cell regeneration, lateral line sensory
    PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
    GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
    GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet
    GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
    GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells

        After clicking the magnifying glass button, the clustering and expression information will be displayed below.