GENE ID: ENSDARG00000038574

Symbol Location Gene type Genome version Species
scg2b 2: 47581997 ~ 47585197 (+) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000038574 (scg2b), yellow represents other genes.
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    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment Neuron (cluster: 2)
    		 marker
    		 DOI:10.1016/j.neuron.2020.09.023
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Neuron (cluster: 15)
    Neuron (cluster: 7)
    Neuron (cluster: 13)
    		 marker
    marker
    marker
    		 DOI:10.1016/j.cell.2008.01.025
    DOI:10.1016/j.cell.2008.01.025
    DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Neuron (cluster: 10)
    		 marker
    		 DOI:10.1016/j.cell.2008.01.025
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Neuron (cluster: 5)
    		 marker
    		 DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (2dpf) head baseline 2dpf, untreatment Neuron (cluster: 4)
    		 marker
    		 DOI:10.1016/j.neuron.2020.09.023
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Neuron (cluster: 10)
    		 marker
    		 DOI:10.1038/s41559-021-01580-3
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Optic Tectum Gaba+++ (cluster: 2)
    Hyp (cluster: 3)
    Pallium (Glut+) (cluster: 4)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain Neuron (cluster: 1)
    		 potential marker
    		 NA
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment Neuron (cluster: 1)
    		 potential marker
    		 NA
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment Neuron (cluster: 1)
    		 potential marker
    		 NA
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Epidermal cells (cluster: 15)
    		 potential marker
    		 NA
    PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos Ionocyte progenitors (cluster: 6)
    		 potential marker
    		 NA
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells Neuron (cluster: 6)
    		 potential marker
    		 NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Neuron (cluster: 11)
    		 potential marker
    		 NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Neuron (cluster: 13)
    		 potential marker
    		 NA
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Neuron (cluster: 14)
    		 potential marker
    		 NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Neuron (cluster: 1)
    		 potential marker
    		 NA
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver Pancreas endocrine cells (cluster: 8)
    		 potential marker
    		 NA
    GSE150498 (DSS treated) intestine disease 6dpf, DSS treated
    GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated Corpuscles of stannius (cluster: 8)
    		 potential marker
    		 NA
    GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS Enteroendocrine (cluster: 5)
    		 potential marker
    		 NA
    GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS Enteroendocrine (cluster: 6)
    		 potential marker
    		 NA
    GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Ciliated olfactory sensory neuron (cluster: 5)
    Microvillus olfactory sensory neuron (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Ciliated olfactory sensory neuron (cluster: 1)
    Microvillus olfactory sensory neuron (cluster: 5)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Ciliated olfactory sensory neuron (cluster: 1)
    Microvillus olfactory sensory neuron (cluster: 3)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2 Somatolactotropes (cluster: 1)
    		 potential marker
    		 NA
    GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis Somatolactotropes (cluster: 1)
    Melanophores (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Pancreas endocrine cells (cluster: 2)
    		 potential marker
    		 NA
    GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih
    PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR)
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone Neuron (cluster: 13)
    Neuron (cluster: 15)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Neuron (cluster: 23)
    		 potential marker
    		 NA
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT Neuron (cluster: 10)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/- Neuron (cluster: 5)
    		 potential marker
    		 NA
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells
    GSE158142 (24hpf) head baseline 24hpf, untreatment
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment
    GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment
    GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated
    GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS
    GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl
    GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
    GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment
    GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
    GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment
    GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment
    GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
    GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells
    PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases
    GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
    GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/-
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
    GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT
    GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/-

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