GENE ID: ENSDARG00000017107

Symbol Location Gene type Genome version Species
nr2e1 20: 32437396 ~ 32446406 (-) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000017107 (nr2e1), yellow represents other genes.
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    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Diencephalon (cluster: 3)
    		 marker
    		 DOI:10.1016/j.neuron.2020.09.023
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo Telencephalon (cluster: 2)
    		 potential marker
    		 NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Neuroblast (cluster: 7)
    		 potential marker
    		 NA
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment Optic stalk (ventral diencephalon) (cluster: 5)
    		 potential marker
    		 NA
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Telencephalon (cluster: 3)
    		 potential marker
    		 NA
    GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment Retinal progenitors (cluster: 1)
    		 potential marker
    		 NA
    GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment Retinal progenitors (cluster: 1)
    		 potential marker
    		 NA
    GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment Retinal progenitors (cluster: 3)
    		 potential marker
    		 NA
    GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment Retinal progenitors (cluster: 3)
    Retinal progenitors (cluster: 6)
    Retinal progenitors (cluster: 3)
    Retinal progenitors (cluster: 6)
    		 potential marker
    potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
    PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development
    PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment
    GSE158142 (2dpf) head baseline 2dpf, untreatment
    GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment
    GSE158142 (3dpf) head baseline 3dpf, untreatment
    GSE158142 (24hpf) head baseline 24hpf, untreatment
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih
    PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih
    GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
    GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
    GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/-
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT

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