CI01000057_00501025_00517941


Basic Information

Item Value
gene id CI01000057_00501025_00517941
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 500868 ~ 517991 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_00501025_00517941.mRNA
GTATATAAAACTTAATATTTACAATATTGAATGCAAGTGAATACCAATTTGGGGAGTAACTTTTGTATTGTATTAGTCATCTGATCACATACGATTTTGGTCAGGTTGACAAAGTTTTCTAATAAATTTCACACTGTCACTGATTTTTATCTAGAAAATGGATCTTGTATTGGTCCCGGAAAAAGTTCACGGACAGTTTTATGAAAGCGACTGCTATTTACTGCTCTCAGTAAGTATACTCTTCCTGAAACCTCCAAATTATGTTGAAAACATTGAAAGCATAGAACACAATTACATGTTATTTTCTGTTGGTGCTTATAGACATCATATTGCCACTTATTCAGAAACTCAGCTGCAGCTTTATGTTTTACATCCCATGTCTTATATGCAGACACGCAAAGGTGGCAGATCTGCATACTATGACATTCATTATTGGATTGGTTCCATGTCTACAATGGACGAACAAGGAGCCGCTGCTGTCTATGCCATTCAGCTGGATGAATTCCTGGGCTCCTCACCTGTGCAGTACCGTGAGGTTCAGCACCACGAGTCCAGCATCTTCTGTGGATATTTCAAACAGGGCATCATTTATAAGTCAGGAGGGGTGTCGTCAGGAATGAACCATGTGGAGACAAACACTTACAACGTTCAAAGACTGCTGCATGTGAAAGGAAAAAGAAAAGTGACCGGCACAGAGGTGGAAATTAGCTGGAACAGCTTTGACACTGGGAGTGTCTTTCTGTTGGATCTGGGCAAGACCATTATCCAGTGGAACGGCCCTGAAAGCAACAGACAAGAACGTCTGAAGGGCATGATGTTGGCCAAGGACATCAGGGACCGTGAGAGAGGGGGTCGGGCAGAAATTGGGGTGATTGAGGGAGATGCAGAGGCAAAATCGCCTTTGTTAATGGAAGTTATGGTGAGCATTATGGGTGAACGGCCCTCTACACTGCCCAGCGGGACGCCTGATGAAATATCTGACCAGGAGCAAATGACAAAGCTCACCCTCTATCATGTGCCAGATGCGAATGGATCTATGAAGATCACAGAGATCGCAACCGGTCCACTAACACAAGACATGCTGAATCACGATGAGTTCATTAAACTGAAGGGTTATCCACTCAGTACTAAAGTGGAGTCTCTCAGTGATGGAGGGGAATCGGCTCTCTTTAAACAACTCTTCAAGAGCTGGACTGTCAGAGAGCAGACAGCAGGTCTGGGCCGGACACACACTGTCGGGAGAATCGCTGATGTCCCTCAAGAGAAATTTGATGCCACTAGGATGCATGTGATGCCCGACGTTGCTGCGCAAGAGCGTATGGTGGATGATGGCAGTGGACAAAAGCAGGTGTGGCGCATTGAGAATTTGGAGATGGTGGAGGTGAATCCTGAAATGCATGGATACTTCTATGGAGGCGATTGCTATCTAATTCTCTACAGCTATGATGTTAACGGCAGGAAGAGCTACATTCTTTACATGTGGAAGGGCCGTCATGCTTCTCAGGATGAAATTACTGCCTGTGCATATCAGGCTGTGACTTTGGACCAGCAATATGGTGGTGAGCCTGTTCAAGTGAGAGTCTCCATGGGAAAGGAGCCGCGCCACTTCATGGCCATTTTCAAGGGCAAACTGGTGATCTTTGAGGGAGGGACTTCCAGAAAGAGTGCCCAAGAGCCAGAGCCCCCTGTCCGCCTGTTTCAGATCTGTGGCTCACACCCAACCAATTCAAAAGCAATAGAGGTTCCAGCTCTGGTAGCCTCTCTCAACTCCAATGATGTCTTTCTTTTGAAAAGCCAGTATGGCGTCTACCTGTGGTATGGCAAAGGCTCCAGTGGTGATGAAAGAGCCATGGCGAAAGAGGTGAGCTCCTTTATTGGCCGAGGATCGTCTGAGGAAATTATGGCTGAGGGACAGGAGCCGAATGAGTTTTGGGAAATTTTAGGTGGAAAAACATCATACGCAAGTGACAGAAGATTACAGATGGTTACTTCAGATCATCAACCACGCCTTTTTGAATGCTCCAATAAGACGGGCCAGTTTATTGCGACTGAGGTAACCCAGTTTGCACAGGATGATCTGAGAGAGGATGACGTAATGCTTTTGGACACGTGGGATCAGGTATTTCTGTGGATAGGAAATGAGGCAAATGATGTGGAGCGTCGGGAATCTGTGACAACTTGCCAGGAATACCTGCGGACTCATCCTGGATCCCGAGACCCCGACACTCCTATAATGATTGTGAAGCAGGGCTTTGAGCCCCCTACCTTTACTGGTTGGTTCACTGCCTGGGACCCTACAAAATGGAGTCAATCCTCTGGTGTAGAGAACAAAAGCATCTCACAATATCCACCAGAAATGCTGATTAACAAACTGGCTGGAGAACTACCGGAAGATGTGGACCCCACGCAGAGAGAGGTGTGCTTTATTATATCTCCGTTTTAGTTTTCAGGAGCTTGAACAGACATTCAGGTAACACTAGTTGGTGCTATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_00501025_00517941.mRNA True 2493 mRNA 0.46 14 500868 517991

Neighbor

gene id symbol gene type direction distance location
CI01000057_00485167_00494040 NA coding upstream 6303 484167 ~ 494565 (+)
CI01000057_00457954_00458159 NA coding upstream 42054 457954 ~ 459865 (+)
CI01000057_00452440_00452721 NA coding upstream 47703 452363 ~ 454003 (+)
CI01000057_00435808_00442819 NA coding upstream 58030 435296 ~ 442838 (+)
CI01000057_00422727_00428274 NA coding upstream 72587 422438 ~ 428281 (+)
CI01000057_00522824_00529929 TMBIM6, TEGT coding downstream 4367 522358 ~ 530573 (+)
CI01000057_00579799_00588289 NA coding downstream 61808 579799 ~ 588713 (+)
CI01000057_00603519_00620072 NA coding downstream 85455 603446 ~ 620122 (+)
CI01000057_00631558_00652724 NA coding downstream 112540 630531 ~ 652734 (+)
CI01000057_00704214_00707893 NA coding downstream 186138 704129 ~ 707903 (+)
G243434 NA non-coding upstream 3542 496744 ~ 497326 (+)
G243477 NA non-coding upstream 41003 420836 ~ 421940 (+)
G243415 NA non-coding upstream 96199 400191 ~ 404669 (+)
G243411 NA non-coding upstream 300190 194141 ~ 200678 (+)
G243509 NA non-coding downstream 44821 562812 ~ 563039 (+)
G243514 NA non-coding downstream 52539 570530 ~ 570908 (+)
G243406 NA non-coding downstream 350923 868914 ~ 869972 (+)
G243412 NA non-coding downstream 362515 880506 ~ 887593 (+)
G243432 NA non-coding downstream 377404 895395 ~ 898119 (+)
CI01000057_00417827_00418207 NA other upstream 80358 417700 ~ 418655 (+)
G243557 NA other downstream 436852 954843 ~ 955195 (+)
G243558 NA other downstream 438072 956063 ~ 958371 (+)
CI01000057_02395285_02396439 NA other downstream 1876607 2394598 ~ 2396561 (+)
G243975 NA other downstream 2058462 2576453 ~ 2576852 (+)
G243991 NA other downstream 2117246 2635237 ~ 2652560 (+)

Expression


Co-expression Network