CI01000057_00704214_00707893


Basic Information

Item Value
gene id CI01000057_00704214_00707893
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 704129 ~ 707903 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_00704214_00707893.mRNA
GTTTAAAAGACTAGACTGTGTAGACTAGCTCACCTCCATATTCCCTTCTGCCTTACACGCTCCACCATCATCCCAGGAGCACTAAATGTCAGACCTGTCGGCGCTTCAGGTCCAAGTTGGACAAAAGAAGGCTAGAGCAGATGGTCCTCATAACCGTGTGTCGCGGTGTCCTCCCAATGAACATCAGTGTCTGGGTTCAGACCTGTGTGTTCACATGAGCAAACTGTGTAACGGCATCCCTGACTGCACTGATGGAGGAGACGAGGGGCCGCACTGCAGAGGAGGTCACAAAGAACCGCAGGGTAACAAGGATCTACAGGCGTCTCTTGCATCGGCTAAGATTCATGAGGCTATCAAACAAACACTGAACAAGAATGATGTGCACAGCAGCAAGGAGGAAGATACTTCTTTCCAAGAAGAACACTTCTGTATAAAGATTGCCAAATACCACATGGATGAGCCAGAAGACTATTGGAAAAAATTATTTCTCAATAGATGAATCCAAAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_00704214_00707893.mRNA True 509 mRNA 0.47 3 704129 707903

Neighbor

gene id symbol gene type direction distance location
CI01000057_00631558_00652724 NA coding upstream 51395 630531 ~ 652734 (+)
CI01000057_00603519_00620072 NA coding upstream 84007 603446 ~ 620122 (+)
CI01000057_00579799_00588289 NA coding upstream 115416 579799 ~ 588713 (+)
CI01000057_00522824_00529929 TMBIM6, TEGT coding upstream 173556 522358 ~ 530573 (+)
CI01000057_00501025_00517941 NA coding upstream 186138 500868 ~ 517991 (+)
CI01000057_00713870_00835798 LRP1 coding downstream 5920 713823 ~ 836026 (+)
CI01000057_00852993_00854987 NA coding downstream 145090 852993 ~ 855169 (+)
CI01000057_00900531_00930709 RBMS2A, RBMS2B, RBMS2 coding downstream 191451 899354 ~ 931448 (+)
CI01000057_01058821_01071240 RARGB, RARGA, RARG coding downstream 349633 1057536 ~ 1071388 (+)
CI01000057_01115280_01118124 NA coding downstream 407377 1115280 ~ 1118309 (+)
G243514 NA non-coding upstream 133221 570530 ~ 570908 (+)
G243509 NA non-coding upstream 141090 562812 ~ 563039 (+)
G243434 NA non-coding upstream 206803 496744 ~ 497326 (+)
CI01000057_00485167_00494040 NA non-coding upstream 219376 484167 ~ 494565 (+)
G243477 NA non-coding upstream 244264 420836 ~ 421940 (+)
G243406 NA non-coding downstream 161011 868914 ~ 869972 (+)
G243412 NA non-coding downstream 172603 880506 ~ 887593 (+)
G243432 NA non-coding downstream 187492 895395 ~ 898119 (+)
G243565 NA non-coding downstream 262488 970391 ~ 970672 (+)
G243574 NA non-coding downstream 293225 1001128 ~ 1001330 (+)
CI01000057_00417827_00418207 NA other upstream 283619 417700 ~ 418655 (+)
G243557 NA other downstream 246940 954843 ~ 955195 (+)
G243558 NA other downstream 248160 956063 ~ 958371 (+)
CI01000057_02395285_02396439 NA other downstream 1686695 2394598 ~ 2396561 (+)
G243975 NA other downstream 1868550 2576453 ~ 2576852 (+)
G243991 NA other downstream 1927334 2635237 ~ 2652560 (+)

Expression


Co-expression Network