CI01000057_00631558_00652724


Basic Information

Item Value
gene id CI01000057_00631558_00652724
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 630531 ~ 652734 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_00631558_00652724.mRNA
ATATATGTATACAGGGCTCCACCTAGTGGTCAGTACCAGCATACATTACAGTATACGCAAACCACATCTCTCAGTTGCATAAAGAAAACTTCAGTGGCGCTGAAGTTTTGATTGATGACGATTGTAATGAAGGTAAAGATGATTACAGTGACATACAGTATATATATAGCGTGGCATGGGTCAGGTGTTTTTTCAAGTGCTATTGCCTATTTCTAGAAAGTTCCCTCAGTGCCGCACATAGATTGCAATATTGCACTTGACTATTACGTTCTTGCCTCAACACCTGTAAAGAGAAAACCCCAACCCCTGCGAGAGCTTCAGATGACGCAAACTCTGGATCAGCATGCACCATTCCAAATTTTTCTATATATCCTAATCACTGTTAATATGTATTCATTACTTCCATGAGCTCGTTGTTTCTACCTTAAATTAATACATTCCTTAAATGAATACATTGTTAGCTAACTGTGTTATTTGTATGTACATTTCTGAAATTACAGCAGTGTGATATCATGTGAGAGGTATGGAAAAATTTGAACTCCAGACTGACCATAAGCCTCTTGTGCCCTTGATAAACACATATGATATTGACAAATCTCCCATAAGATGCCAAAGACTACTAATGCGCCTGATGAGATTTAATGTCAAAGCAATGCAAGTGCCAGGCAAACAGCTCGTGGTGGCCAACACTCTGTCTCAAAATCCATTGACACATCAGGGCGAGTCTGACACAGAGGAGGACGTCAAGGTGTTTGTACAGGCAGTACTGTCTACTAAGCCTGTAAGTGAAGACAAGTGCCATAAGGAAAGCCACGCAAGAAGATTCAGATCTTCAGTCAGTACATTCACCAAGGCTGGCCCAGTCAGATGTCTCAACTGTCACACTCACTTCATGGGTTTCACACTGTCTCTCTGAAGTTGATGGACTTTTGTTGTCCATGAGGATAGAATAGTGATTCCAGGTTCACAAAGACAAGAGGTGTTACGTCAACTTCACACAAGCCATCAAGGTCTCACGTGAGCCAACATGTCAGTATGGTGGCCTGGTATTGGCAAAGACATCACAAAAACAGTGGAGACATGTGAGTTTTGCCAAGTCAACAAGAATACACAAAAGAGAGAGATGGTTACAACTCTTCCAAACAGTCCATGGCAAAAGATCACTGCGCACATCTGTGAACTAGATGGCAAGAAACACCTTATAGTCATGGACTGTTATTCTCGTGATACTGAGATTGCACAATTACAAGCAATCACAAGCCAGCAGGCTAATGGTGCTGCTGAAAGGAGTGTTGCTATTGCAAAGCGAATGCTCAGACAGCCAGATCCACAGCTAGCTCTTATGATTACCTATCGTTCTACACCTATCAGTGCAACTGGACTAAGCCTAGTTGAACTTATGATCGGACGCCAGAGCAGAACAACAGTTCCGATCCTGCCAAAGAACCTGCTACCAAGTCCAACTGACTATGAACAAGTCAGAAGGAAGGACAAACAAACCAAACAGGCATGCCAGTACTTTTACAACCGACGCTACTCAGCACGCAGTTTACCTGACTTGCATCCAGGTCAAAGTGTGAAAGTCAAGCTGGATGGAGAAAAAGGCAAGTCGTTGGAAAAGCTCATGAACCCAGGTCATACATTGTACAGACAAAGGAAAGGATCCAGAGCGTTCCAGAAATTAACTGATGGACCCTCTCTTGAGACTGATATAACCACAAACTCTATGAATGGATCTAGTACCCCATCTCCCACCACACCACACACATACTGTACACTCACCTGTAAAACCCTTGCTGGCAGAGAGGTAAAACAGCCTGCAAAGTTTAAGGAAATGTTTTGGGGGTTGCTGGGCAAAAGGGGCGGGGTTATAGAGACAGTCACAGAAATGACAAAAGTCCTTTTTGAAAGTGAAACATTTAATCAGCTTGAATCGCGCAGTACAGAGGTTTACAGCTCACATGTTCCAAACCTCACGGTTTTCGCTCAAGTTTGCTTTCGGTTGCTGATTGGAGATTCTCTCGCAGCCATGTCACAGGAACAGCCAGAGCCAGTTGACATTGACCAATATGACATTTATACAGCTCGAGATGAAAGGCCACAACCTTCAGCACCACTGGACATTGCTAAATTTATAATCAAAGTGGACTGGACAGACCCATTTCCAAACAGATGGAGAGCAACATTACAGAAAGCCCTTCAGAGCTGTTTGCTCAGACTGGAAGGAAAACCATCTGTCCTCAGCCTTAAACTCATGGATGATCCATCCTGTGCAGAGGTGCAGATAACACCATCAACAGCTCTAGAAGCTTTAAAAAAGCTCAGGTCTATACCTTTGAAGTTTAAACATGAAAATAAGGAAGTGACTGCATGGATTTGTCCGGATGAAACACAGTGTGTGACTGTACCATGCCAGACGTCCATGCTGTACGAGAATGGAATTCCTTCATCAAAGGTGATTGGCTCTATGCCTGTGACTGCAGCATCAGAAGACACTAATAATTTTGAGGACGTTGCTGTATCTGTTAGAGCTCCAAACAAAGCTGAGACCACTAACACTGATAAAATGAGCTCTGAGACACCAGCTGTACTGACTGTCCCCCTTTATGAGTTCTGGTACATGCATCACACTTACAGAAAAGAGTTAGAACAATTTGAGAAACAGCATGGAGTCTCTATTTGTGCAGAAGTGTCCGTCTCAATCAAACATATCCAGAGCTCAAGCCCTGATTCTGTGTCTAAAACCACTGAGGACTTTCAGACACTTGTTCAGAGATGTACGGATAGTTTTAGTGACGCTGCCATAAATCATAACATGAATTCAGATATTGTGAAGCAGGCCCTTCAGGACATTCAATCAGAGGAGTCAAAGATGATGTTCACCATGTCTGCCAGTAACTGTCTGTTCTTTGGGCCGAAGAAATTTACAGATGCGATTAAAAGAGAGACAACAAAACTGGAACAAAAATATAAGGACAAACTTCAGAAGAGTGTGTTTGATGACAAGAAGAAGCAATTGATAAGTTACTCAGGGGACATTCCTCATGCAACAGGAATCAAATGGAATCCGATGCCTGATTATGGATCAGGAGCAGTGGGTGGATCAGTACGGGATGAGGGAGTAAATTTTAGAAGACAAAGTGAAGCAGATACTGGATTTAATGAAGATTCAAAAGACAATTCTAGACATGAGAGTAAAGATGCTCATGCTGAAGAGGAGACGTGTGCTATTTGTATGGACAGCTTCACCCACAAGAAAAAACTGAAATGTGGACATGAATTCTGTCGGGAATGTATAAGTGCATCAGAAAAGAGTCTGGGATCCATCTGTCCTGTGTGTAAGGAAGTGTATGGGAAATTGAAGGGAAACCAACCGAATGGAACAATGACTATAACAAAGAGCAGATCAAGTCTCCCTGGATATCCACTATGTGACACTATTGAAATCACCTACAACATTCCTAGTGGTGTTCAAACGGAGAAGCATCCAAACCCGGGAAAGCCTTTTAATGGGACAAATCATCAAGCGTACTTGCCAGACAATCATGAAGGAAAAGAAGTGCTCACACTGCTGCAGAGGGCTTTTCAACAGAAACTGATCTTTACTATTAGGAAATGTACTACAGGTGCAGAGAATGTGGTCACCTGGAATGATATTCATCATAAGACCAGTAAATATGGTGGGCCTAAATGTTTTGGTTATCCAGACCCTGACTACTTGAAGAGAGTGAAAGATGAGTTAAAGGCCAAAGGCATTGAAACAGAAACAACAGGACTGGACAGCCAATTCAAAGACAAACTTCAGAAGAACGTGTTTGATGGCAAGATGAAGAAATCGACTGGTTACTCAAGAGGAATCAAATGGAATCAGATGCCTGATTATGGATCAGGAGCAGTGGGAGGACCAGTATGGGATGATGGAGTGAATTTTAGAAGACAAATTGATACTGAGGAGACGTGTGCTATTTGTATGGACAGCTTCACCGACAAGAAAAAACTGAAATGTGGACATGAATTCTGTCGGGAATGTATAAGAATGTCAGTGGAGAGTCTGGGATCCATCTGTCCTGTGTGTAAGGAAGTGTTTGGGATATTGGAGGGGAACCAACCGAATGGAACAATGAATGTAACAACAAGCAGAATGAGTCTTCCTGGATATCCAGATTGTGGCACTATTGAAATTACCTACAACATACCCAGTGGTATTCAAACGAAGAAGCATCCAAACCCAGGAAAGCCTTTTCTTGGGGCAAATCGTCAAGCGTACTTGCCAAACAACCGTGAAGGAAAAGAAGTGCTCTCACTGCTGGACAGGGCTTTTAAACAGAAACTGATCTTTACTGTCGGGAAATCAACAACTACGGGTGCAGAGAATGTGGTCACCTGGAATGATATTTATCATAAGACCAATAAATACGGTGGGCCAGAAAGGCTCGGACATATTCAGGTACAGTTGAAAGCTACTAACAGCTTGATTGTAAGCTGTATGCTTTTCCTCTTCTGTCCACTAGATGGCAGTATCATATACCAAGAGTTTCACACAAACTCCATAACTACTATATTTCAGACAGTTACATAATGCTTATGTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_00631558_00652724.mRNA True 4589 mRNA 0.42 14 630531 652734

Neighbor

gene id symbol gene type direction distance location
CI01000057_00603519_00620072 NA coding upstream 10409 603446 ~ 620122 (+)
CI01000057_00579799_00588289 NA coding upstream 41818 579799 ~ 588713 (+)
CI01000057_00522824_00529929 TMBIM6, TEGT coding upstream 99958 522358 ~ 530573 (+)
CI01000057_00501025_00517941 NA coding upstream 112540 500868 ~ 517991 (+)
CI01000057_00485167_00494040 NA coding upstream 135966 484167 ~ 494565 (+)
CI01000057_00704214_00707893 NA coding downstream 51395 704129 ~ 707903 (+)
CI01000057_00713870_00835798 LRP1 coding downstream 61089 713823 ~ 836026 (+)
CI01000057_00852993_00854987 NA coding downstream 200259 852993 ~ 855169 (+)
CI01000057_00900531_00930709 RBMS2A, RBMS2B, RBMS2 coding downstream 246620 899354 ~ 931448 (+)
CI01000057_01058821_01071240 RARGB, RARGA, RARG coding downstream 404802 1057536 ~ 1071388 (+)
G243514 NA non-coding upstream 59623 570530 ~ 570908 (+)
G243509 NA non-coding upstream 67492 562812 ~ 563039 (+)
G243434 NA non-coding upstream 133205 496744 ~ 497326 (+)
G243477 NA non-coding upstream 170666 420836 ~ 421940 (+)
G243406 NA non-coding downstream 216180 868914 ~ 869972 (+)
G243412 NA non-coding downstream 227772 880506 ~ 887593 (+)
G243432 NA non-coding downstream 242661 895395 ~ 898119 (+)
G243565 NA non-coding downstream 317657 970391 ~ 970672 (+)
G243574 NA non-coding downstream 348394 1001128 ~ 1001330 (+)
CI01000057_00417827_00418207 NA other upstream 210021 417700 ~ 418655 (+)
G243557 NA other downstream 302109 954843 ~ 955195 (+)
G243558 NA other downstream 303329 956063 ~ 958371 (+)
CI01000057_02395285_02396439 NA other downstream 1741864 2394598 ~ 2396561 (+)
G243975 NA other downstream 1923719 2576453 ~ 2576852 (+)
G243991 NA other downstream 1982503 2635237 ~ 2652560 (+)

Expression


Co-expression Network