Gene
RNA
| Item | Value |
|---|---|
| gene id | G1647510 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 63354114 ~ 63355784 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1885113 | False | 438 | lncRNA | 0.35 | 2 | 63354114 | 63355784 |
| TU1885114 | True | 371 | lncRNA | 0.35 | 2 | 63354114 | 63355784 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498286 | NA | coding | upstream | 7822 | 63339785 ~ 63346292 (+) |
| LOC110498285 | NA | coding | upstream | 37298 | 63312561 ~ 63320421 (+) |
| LOC118941523 | NA | coding | upstream | 43473 | 63309348 ~ 63310641 (+) |
| LOC110498284 | chp1 | coding | upstream | 44871 | 63292569 ~ 63309243 (+) |
| LOC110498282 | NA | coding | upstream | 66742 | 63248622 ~ 63287372 (+) |
| LOC110498409 | LOC106592792 | coding | downstream | 25124 | 63380908 ~ 63414582 (+) |
| fbln5 | fbln5 | coding | downstream | 79540 | 63435324 ~ 63500172 (+) |
| LOC110498294 | LOC106599381 | coding | downstream | 151002 | 63506786 ~ 63534703 (+) |
| plek2 | plek2 | coding | downstream | 202019 | 63557803 ~ 63565484 (+) |
| LOC110514319 | rbm25 | coding | downstream | 292585 | 63648369 ~ 63719010 (+) |
| G1647507 | NA | non-coding | upstream | 15786 | 63338065 ~ 63338328 (+) |
| G1647504 | NA | non-coding | upstream | 19575 | 63330144 ~ 63334539 (+) |
| G1647421 | NA | non-coding | upstream | 24458 | 63322294 ~ 63329656 (+) |
| G1647502 | NA | non-coding | upstream | 51574 | 63301911 ~ 63302540 (+) |
| G1647524 | NA | non-coding | downstream | 38271 | 63394055 ~ 63394273 (+) |
| G1647528 | NA | non-coding | downstream | 57689 | 63413473 ~ 63414407 (+) |
| G1647529 | NA | non-coding | downstream | 61347 | 63417131 ~ 63418627 (+) |
| G1647532 | NA | non-coding | downstream | 69660 | 63425444 ~ 63425999 (+) |
| G1647477 | NA | other | upstream | 150057 | 63202756 ~ 63204057 (+) |
| G1647411 | NA | other | upstream | 276971 | 63075149 ~ 63077143 (+) |
| G1647342 | NA | other | upstream | 335426 | 63016955 ~ 63018688 (+) |
| srsf5a | LOC106611464 | other | upstream | 860395 | 62486921 ~ 62493719 (+) |
| G1646509 | NA | other | upstream | 1208824 | 62144183 ~ 62145290 (+) |
| G1648296 | NA | other | downstream | 772424 | 64128208 ~ 64129068 (+) |
| G1648608 | NA | other | downstream | 1624580 | 64980364 ~ 64980943 (+) |
| G1649268 | NA | other | downstream | 2105989 | 65461773 ~ 65463454 (+) |
| G1649291 | NA | other | downstream | 2188593 | 65544377 ~ 65545055 (+) |
