XLOC_006809 (map4k5)


Basic Information

Item Value
gene id XLOC_006809
gene name map4k5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 36705595 ~ 36761454 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013105
GTGGACGTgcgtatgagtgtgcatgtgtgtgtgtgttttctgtacgtgtgtgcgaatgtgtgtcTTGCTgtctgtctgcgtgtgtgtgtgtgtgtgcgggttcTGATCTGGCTGAAGTTTGCTCTTGTCTCTGTTCCTGTTTGGATGATTATTTCGACGCATAATGAACTCCAGCAGTTAGGAAACCGTCTATATCTTCTCGAGTTCAGAAGACAAAGATTAATCGCACAAATGgacAATGTGGACTACAGGTCTGTTGTAAAACTGAATCTGGGTCATTAAAGTAGTAAATCCTCCAGTCCGACAGCATGGATCCGCTGGCCCGGTCCGGAGGGGAGATTCAGCGCAGAAACCCACAGCATGACTTTGAGCTGATCCAGAGAGTTGGCAGTGGAACATATGGAGACGTGTATAAGGCTCGAAAAATCTCCACAGGAGAGCTTGCAGCAGTGAAGATCATCAAACTTGAGCCTGgtgatgATTTCTCAATCATCCAGCAGGAGATTTTCATGGTGAAGGAATGCACCCATCACAATATTGTGGCTTACTTTGGCAGCTACCTCTGcCGTGAAAAGCTGTGGATTTGCATGGAATATTGTGGTGGAGGATCATTACAAGACATTTACCATGtTACGGGTCCGCTATCCGAACTTCAGATTGCTTATGTGTGCAGAGAGACGTTACAGgGTTTGGGGTATTTGCACTCCAAAGGGAAGATGCACAGAGACATCAAGGGGGCAAATATTCTGCTCACAGACAATGGAGATGTCAAATTAGCGGACTTTGGAGTTGCCGCTAAAATAACAGCCACAATGGCGAAAAGGAAATCCTTCATTGGGACACCCTACTGgATGGCTCCAGAAGTTGCTGCAGTGGAGAAGAATGGAGGTTATAATCATCTGTGTGATATCTGGGCTGTTGGTATCACATCCATTGAACTGGCAGAACTACAGCCGCCCATGTTTGACCTCCATCCTATGAGGGCTTTATTTCTCATGTCTAAAAGCAACTTCCAGCCACCTAAGTTAAAGGACAAGACTAAATGGTCTACAGCCTTTCATAATTTTGTTAAACTTTCTCTCACAAAAAACCCGAAGAGGAGACCAACAGCTGAGAAGATGCTTTCGCACTTATTTGTGGGCCAGACAGGTTTAACTCGACGGTTAGCTTTAGAGCTGCTCGATAAGATGAACAACCCAGATAATCACCAGTCACACTTCAGTCAGGGAGATGAAGATGACTTTGAGCCACTTGCAGAGCGTCACACCATCCGCTCCACTCACAGCCGAAGCGCCCGTGCTGAAAGAACCCAGTCACAGATCAACTTTGATAAGCTTCAGTTTGAGCCCCCTTTAAGGAAAGAGACTGAAGCAAGTGCTGAGATGgatGTGACTAAAGACAATGATTTCCCATCCCCCTGGAGCCCGTTTACAGATGGTCCTATCACCTCCAGAGGTCATTTGGCTCCATTAGAAGATGCTTTTGAGGATGTTGATCTTTCAACACTTGGAAAGGGAGTCCCGCCACCTCTTCCTCCTAAGCCATCTCAGGCTCGGTCAAGCAGTGTGTCTGATGAGTTCGGTTTGGCCGATGGCTGCCAGACGGTGCGGCGGTTTCCGGGGTCTGATAATGGGCCGATGCCGGTGGCCCGCAGACAGAGCACACCTGAGAGAGGGAGTAACGCGGAGCACACCCATTCAGACTATCTGTCTGTGAGCGTCAGCAGCCCTGGACTGCTCTCACACACCACAGACCACGAGGAAGATTCAGACGGAAGTGTAAATGGAGACGTTTCAAAGTCGCCTCCTGGTCGGCCGCAGAGGAAAGAGAGAAAAGATTTCCCTAAACCTGCTATTAATGGCCTGCCGCCCACTCCTAAAGTCTTGATGGGAGCTTGTTTCTCGAAGGTTTTTGATGGTTGTCCTCTAAAAATTAACTGTGCCACATCATGGATTCACCCAGAAACCAAAGaccagtATCTGATATTTGGCACAGAAGATGGCATCTACACTCTCAACCTGAACGAGCTGCATGAAGCCACCATGGAGCAGCTGTTTCCTCGACGGTGCACATGGCTGTACATAATCAATAATAATCTGATGTCATTATCAGGGAAGACGTTTCAGTTGTATTCGCATAATTTGATTGGACTGTTTGAACAGCTCAGGAAACCTGGACTGGCCACTCAGTTTCACACCCACAGATTCCCTGACAAGATACTGCCCAGGAGATTTGCTCTTACCACCAAGATCCCCGACACCAAGGGATGCCACAAGTGTTGCATTGTGCGGAATCCATATACAGGTCATAAGTATCTCTGTGGAGCTTTGCAGTCTGGGATTGTTTTGCTGCAGTGGTACGAACCCATGCAGAGATTCATGCTTATAAAGCACTTTGATTTCCCAGTGCCCAGTCCGCTGCGTGTGTTTGAGATGCTGGTGGTCCCAGAGCAGGAGTATCCTCTTGTGTGTGTGGCGGTCAGTCAGGGCTCAGAGCCAGGGCAGGTCGTTCGCTTTCAGACCATCAACCTCAATTCCTGCTCCTCCTGGTTCACTGAAGTTGGATCAGGTGGTAACCAGGTTGATGCAATCCACGTGACTCAGTTGGAGAGAGACACCGTACTTGTATGCCTGGACAAGAACGTCAAAATCGTGAACTTGCAAGGAAAGCTGAAGTCTAATAAGAAACTGGCATCTGAGCTGAGCTTTGATTTCTGTGTCGACTCTGTAGTGTGTCTCCAGGACAGTGTTCTGGCATTCTGGAAACATGGGATGCAGGGGAAGAACTTCAAATCAAATGAGGTCACACAGGAGATTTCAGACCCGAGCCGAGTGTTCAGACTCCTGGGATCTGACAGGGTCGTTGTTCTGGAGAGCCGGCCTACAGATAACCCCACCGCTTACAGTAACCTCTACATCCTGGCGGGACACGAGAACAGTTATTAGCTCCACCTTCTCTGAGCCACTGCTGGAGCCTTTGTATCAGATCCACACCGACGCTGGACAACCACAGCTGAGCTGATGTGCAGACTGTGTTTAGTGCGAAATCTCACTGCAGTCTTATGCAGTAACACCGCCCACATGCCAGAGACCCCAGacgtcaaacaaacaaacaaacataatcaaACATCATGCAGTTCAACAACAGCCGATTTGTGCAAATCAAGCAAGCTCTGCATTCAATACTCGTTTGTTTTTTAACCCTATTAAATGTAATCATTCTAAACATTTAAACCAATGTTAAAGGTGCAGAGATAGACCATTGAGCATGCATCGCAGCTCAGAAAGTGCCATAATAAGGGAAcggttttaataaaattaattaactttGGAGGTTTTTGTTAACGGGGATTTCAGATGTCAGGCTTTTAATGCCTGCTTAATGGGAAGAGTTTTGGGAAAGTGAGCGAGTGAGAGTTATTTATTCAGCCGAGTCGTGTGGAGCATCTCACCCTCATGACTGAGTGAATATTTTTCTGCTGCAGgtcattttttattctttgtgTGTAGCTTTTACTTCCTCAGTTTCcgagtaatattttaatttttcagtTACCGCTTTTAAAAGTAAGTTTAATTCGATACTTGCACCATGTAAGCACTTTTGTACATGtttctttttgtatttaaaaatgacaaaacatgGGAGATGCGAGGTTACTGTGATATCTCAAGTGTTTCCGTTGCTTTAGTTGTAATGTAAGCAGCTTTTGTAATAAAATGGCAACTTGTTAAC
>TCONS_00013106
ctgcgtgtgtgtgtgtgtgtgcgggttcTGATCTGGCTGAAGTTTGCTCTTGTCTCTGTTCCTGTTTGGATGATTATTTCGACGCATAATGAACTCCAGCAGTTAGGAAACCGTCTATATCTTCTCGAGTTCAGAAGACAAAGATTAATCGCACAAATGGTGAAGTTTACCTCAAAGTTTTTGAATgacAATGTGGACTACAGGTCTGTTGTAAAACTGAATCTGGGTCATTAAAGTAGTAAATCCTCCAGTCCGACAGCATGGATCCGCTGGCCCGGTCCGGAGGGGAGATTCAGCGCAGAAACCCACAGCATGACTTTGAGCTGATCCAGAGAGTTGGCAGTGGAACATATGGAGACGTGTATAAGGCTCGAAAAATCTCCACAGGAGAGCTTGCAGCAGTGAAGATCATCAAACTTGAGCCTGgtgatgATTTCTCAATCATCCAGCAGGAGATTTTCATGGTGAAGGAATGCACCCATCACAATATTGTGGCTTACTTTGGCAGCTACCTCTGcCGTGAAAAGCTGTGGATTTGCATGGAATATTGTGGTGGAGGATCATTACAAGACATTTACCATGtTACGGGTCCGCTATCCGAACTTCAGATTGCTTATGTGTGCAGAGAGACGTTACAGgGTTTGGGGTATTTGCACTCCAAAGGGAAGATGCACAGAGACATCAAGGGGGCAAATATTCTGCTCACAGACAATGGAGATGTCAAATTAGCGGACTTTGGAGTTGC
>TCONS_00013107
GTTTGGATGATTATTTCGACGCATAATGAACTCCAGCAGTTAGGAAACCGTCTATATCTTCTCGAGTTCAGAAGACAAAGATTAATCGCACAAATGGTGAAGTTTACCTCAAAGTTTTTGAATgacAATGTGGACTACAGGTCTGTTGTAAAACTGAATCTGGGTCATTAAAGTAGTAAATCCTCCAGTCCGACAGCATGGATCCGCTGGCCCGGTCCGGAGGGGAGATTCAGCGCAGAAACCCACAGCATGACTTTGAGCTGATCCAGAGAGTTGGCAGTGGAACATATGGAGACGTGTATAAGaGGTAAAACAAGTAAAGCTTATAAGGAACCATCTGGAAACCAAATATCAGGTGATGCAGTTAGTGGCAGGTATCACATTATTATTGCTCATACCTGTCTAGCACATTTGAATAAACCAATAATCCTTTGGATATAACTTTACAGCACCATTTGTTCTGTAAATGTATGATACCTCTAATC

Function

symbol description
map4k5 Predicted to enable MAP kinase kinase kinase kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MAP4K5 (mitogen-activated protein kinase kinase kinase kinase 5).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0016310 phosphorylation biological_process
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function
GO:0008349 MAP kinase kinase kinase kinase activity molecular_function

KEGG:

id description
ko01001 Protein kinases

ZFIN:

id description
ZDB-GENE-030131-6497 Predicted to enable MAP kinase kinase kinase kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MAP4K5 (mitogen-activated protein kinase kinase kinase kinase 5).

Ensembl:

ensembl_id ENSDARG00000039125

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013105 False 3735 mRNA 0.46 33 36705595 36761454
TCONS_00013106 False 745 mRNA 0.46 9 36740471 36761379
TCONS_00013107 True 485 processed_transcript 0.41 3 36757555 36761316

Neighbor

gene id symbol gene type direction distance location
XLOC_006808 cdkl1 coding downstream 2431 36693152 ~ 36703164 (-)
XLOC_006807 l2hgdh coding downstream 25064 36666662 ~ 36680531 (-)
XLOC_006806 sos2 coding downstream 42237 36638955 ~ 36663358 (-)
XLOC_006805 cdkn3 coding downstream 83669 36612930 ~ 36621926 (-)
XLOC_006804 BX927407.1 coding downstream 93436 36587770 ~ 36612159 (-)
XLOC_006810 sav1 coding upstream 25623 36787077 ~ 36798204 (-)
XLOC_006811 nin coding upstream 38880 36800334 ~ 36844945 (-)
XLOC_006812 pygl coding upstream 85335 36846789 ~ 36863039 (-)
XLOC_006813 trim9 coding upstream 106911 36868365 ~ 36911118 (-)
XLOC_006814 NA coding upstream 234179 36995633 ~ 36997760 (-)
XLOC_006471 BX537274.2 misc downstream 26440690 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 35879370 825904 ~ 826225 (-)
XLOC_006797 CR361558.1 non-coding downstream 306220 36399260 ~ 36399375 (-)
XLOC_006785 BX510990.1 non-coding downstream 743129 35962350 ~ 35962466 (-)
XLOC_006784 NA non-coding downstream 780111 35925042 ~ 35925484 (-)
XLOC_006779 BX663524.1 non-coding downstream 1113218 35592242 ~ 35592377 (-)
XLOC_006815 NA non-coding upstream 248358 37009812 ~ 37012236 (-)
XLOC_006817 NA non-coding upstream 348758 37110212 ~ 37110536 (-)
XLOC_006819 AL845493.1 non-coding upstream 417148 37178602 ~ 37178716 (-)
XLOC_006829 NA non-coding upstream 766707 37528161 ~ 37535785 (-)

Expression


Co-expression Network