nudt17 (nudt17)


Basic Information

Item Value
gene id nudt17
gene name nudt17
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 12505041 ~ 12512935 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007249667.3
gacttttattatgaaaagtCGGCAGCCATTTTTCTGGAGGGTCTGTCTTTTGCAGCATCAGACTGGTTTTGGACTGGAGTTGGAAGTTTCTTCAACAGGAGAGACTCTTACTTGGACAGGTTTTGAAGGACAGTCTTTTTAGCGTTGTTTGGGAAGAATATTATAACGTTATTTATTTCTGGGGTTTTCTATTCAATGTTTCTGTAATTTTTCCTAGCTAGGCTAGAAAGTGAATGAGCCCTTCTGCTAACTATGTTTTCAGCTGTTAATATGTGCTGTTAGTTGGCTGAgtgtatacataaatatatgtatattatcaGCCTGATAAATGTTGGTGAATAGCTGTTAAACATGGAGATGGTGAGAAGGATCCTGGTCCACTTGTCTAAGGATAACGCAGCTCCACAGTGTGCCCGGTTTGTTCAGAGCATTACCGGCCACTTTATAGGAAATGCTGACGACCAGGCCACTGTGAACTGCTCCCTGGAGAATAATCGATTTATTCTGTGTGAGGGGAATCATGAAGGGGGCGTTCCTCTCAAGAGGGCGTCGTTCTGCCCAATCAAATTCCTCTCTCACTCAGAGGCGGACTCCCTACCTTCAGATATACTGAGCCGCGGGGTGGATGTGGGCGTGGCCGTCCTTCtggagtcagccaatcagaggctgtTGCTGACCAGGCGGGCTTCATCTCTCAGGATTTTCCCCAATGTCTGGGTCCctcctggtGGACATGTTGAATTGGATGAAAAGCTACTGGATGCCGGCCTGAGGGAGCTGAGGGAGGAGACTGGGCTCAAACTCGATCCTGAAGACATCTCCTCAACTCGACTACTGGGCCTCTGGGAGTCTGTCTATCCGCCCATGCTGTCCCACGGATTGCCCCAGAGGCATCACGTTGTCACCTACATGCTCCTGTCATGTCGCCTTACACACCAACAGCTACAGTCCTGTCTGAGGCCAGAACCTGGGGAAGTGAGTGGATGTGTGTGGGCTGATGTGGGCCTGGTTAAGGCTATTGTGTCTGCAGTGGACGGTGAGGAGGATGCTGTTTGTGTACCTGCTGATCTGCCTCGGTCAATCAGTGTGACTGAAGTGTCTCCAGAAGGTGAACTCAGTGAATCTAAGATGCCGGTGTTGGTGTTCTGTAACCGAGCGCCAGCTGAGGGTGAGGACGTGGAGCGGGTTAGTACTGGGACCAAGTACGCCTTAGAACTCTGGCTGAAGACCCTGGAAGCCAGCTTTAATAAGAGCTGAATACATCTGACTTCTCTTTATCAGCCCTTTTCTGTGGAACATATGAAGCAGTGCCTTTAGGATCACAGCATCATCTGCTGGACATCTTCTCTGTTACCTTTAATGAAGCACTGATTTTCTGTGATTGTATTTGTGAAGAGTTGTCGACAAGTCTGTCCATAATCTTAATATCAGTTTGTGTtgatcatatacagctctggaaaaataagagatcacttaaagatgagtttctttaatttttccaaatttaaaac

Function

symbol description
nudt17 Predicted to enable NADH pyrophosphatase activity. Predicted to be involved in NAD catabolic process; NADH metabolic process; and NADP catabolic process. Predicted to be active in cytosol and peroxisome. Orthologous to human NUDT17 (nudix hydrolase 17).

NR:

description
PREDICTED: nucleoside diphosphate-linked moiety X motif 17

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007249667.3 True 1511 mRNA 0.47 8 12505041 12512935

Neighbor

gene id symbol gene type direction distance location
LOC103045643 si:dkey-7j14.5,LOC108436563,LOC108269355,LOC107666850,LOC107719133,LOC107592309,LOC107686177 coding upstream 913 12492664 ~ 12504128 (+)
LOC103029364 NA coding upstream 14655 12483951 ~ 12490386 (+)
LOC103029682 NA coding upstream 22479 12473174 ~ 12482562 (+)
adam15 adam15,LOC107717790 coding upstream 33011 12425639 ~ 12472030 (+)
dcst1 NA coding upstream 80824 12387903 ~ 12424217 (+)
thbs3 thbs3,thbs3a,LOC107666739,LOC107719129,LOC105896172,LOC106605431 coding downstream 44075 12557010 ~ 12585238 (+)
hfe2 hfe2 coding downstream 78123 12591058 ~ 12599849 (+)
LOC103036326 txnip,LOC103036326 coding downstream 94353 12607288 ~ 12610047 (+)
ankrd34a ankrd34a,LOC107719128,LOC107666885,LOC107714325,LOC107592270 coding downstream 128486 12641421 ~ 12665395 (+)
ttc24 ttc24 coding downstream 231301 12744236 ~ 12760023 (+)
G90321 NA non-coding upstream 132805 12368843 ~ 12372236 (+)
G90245 NA non-coding upstream 214950 12286434 ~ 12290091 (+)
G90227 NA non-coding upstream 306244 12198521 ~ 12198797 (+)
G90188 NA non-coding upstream 395570 12107808 ~ 12109471 (+)
G90159 NA non-coding upstream 486699 11992754 ~ 12018342 (+)
LOC111193294 NA non-coding downstream 17105 12530040 ~ 12530995 (+)
G90382 NA non-coding downstream 88567 12601502 ~ 12602261 (+)
G90452 iqgap3,LOC106605450,LOC105031059 non-coding downstream 214430 12727365 ~ 12741544 (+)
G90459 NA non-coding downstream 279577 12792512 ~ 12792983 (+)
G90488 NA non-coding downstream 396425 12909360 ~ 12997600 (+)
G90199 cct3 other upstream 348179 12154897 ~ 12156862 (+)
LOC103025787 LOC103025787,LOC100536175,LOC107587908 other upstream 366179 12135279 ~ 12138862 (+)
LOC111193328 NA other upstream 1597869 10903683 ~ 10907172 (+)
LOC103044517 onecutl,LOC108441924,LOC107732477,LOC108268128,LOC107741751,LOC106580869,LOC107663311,LOC107689849 other upstream 1713913 10780102 ~ 10791128 (+)
G89806 NA other upstream 1816221 10688266 ~ 10688820 (+)
LOC103044318 mtx1a,LOC108436561,LOC107719130,LOC107592302,LOC107666872,LOC107686169,LOC107592422 other downstream 19366 12532301 ~ 12552772 (+)
npy npy other downstream 431851 12944786 ~ 12948250 (+)
eif1b eif1b,zgc:56676,LOC107657782,LOC107599656,LOC105910901,LOC107712803,LOC105027100 other downstream 1759060 14271995 ~ 14274698 (+)
LOC103029466 c1ql3,LOC103029466,LOC108428918,LOC107677106,LOC107599742,LOC107555006 other downstream 2132863 14645798 ~ 14652282 (+)
LOC103045856 NA other downstream 2149722 14662657 ~ 14773367 (+)

Expression


Co-expression Network