CI01000009_02284485_02285584


Basic Information

Item Value
gene id CI01000009_02284485_02285584
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 2284485 ~ 2286129 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_02284485_02285584.mRNA
CTGCACTGATGAGCTGAAGAATGAACACAAAGAGAGAGCAGACCCCTACATCCTTCTCACAATACGCCTACCATCATCAGAGAGAAAGTTATCACCTCAGGAGAGTACGACAGGAGAAGATGGCTTTAAGAAAAGCACTGAAGGCCGATTATTCCTTGTATTTTATCATTATTCTTATGATTATAATCTGCATTCTCATTCAGGCACCCCTATCCACAAGATGGAATTGCTTTCCCCCCTCTTTCATGGCTTTCACCGTGCCCTGACATTGAAAGAATTGCTTCTTCTTTTTTCAACCGCTGTCCTTCGGAGGGGTGGATGTCAGAGTTTGGGTGCAGGAGAGGGTGTTGTTTGTAATTTAGAGAGTAATGAATGGCACCACACTGGCCCGTGTAAACGCATTTACCTCGACAAGCAGCGAACGAGGGAGTGGATTATAGACGGTGGGGTTGGAGAAAGAGTGTGGGCTAATTATTATTGGGCTGCCGGGTTTGATGTGGGGTTTGTTAGGGGAGTTGAATGGGGTGGCTTCGGGCAAGGCTGGGGTGAAAGAAAGGCTCCGTCCTTGTGCTGCAAAAGGGGTGCACAATTAATTATTTCAATCAGTTTGGATGCAGCCGAGTACACACGCATGCACAAGCTTACTCTGACAGAGAACAAGATGAAAAAAAAACAGCATATGTGCTAAAAGATGAACTTTTGCACTAGTTTTAAACAACAGGCGCACACATACTGTTTCAGTATAACTAGTTTAATTCTAAGAAAACACAAAGGAGAGATAAACACAATATGGGAGACAGTTAAGGCTAGGAGATTTTGCAGAATGTAAAGCTGAAAACTCTTCCCAAAAAGGTTCAATTTGTTTACATTAGCTAATGCCAACTTGCACATTCAAGTTTAAACTACTTGAAATGTTAAAAATGTATTAGTATATGTAGAAATTAACATTAATCAAGATTGATAAATGCTGTAAAAGTATTGCTCAATGTTTGTTTATGAAAATTTATTATCATTTACTCACAATCATGTTGTTCCAAACCTGTGTGACTTTTTTTTTCTTCTGTGAAAAAAAAAAAAAAGATTTCATATTTCATGTTCCACAAAAGAAAGTCAAACAGGTTTAAAAACATCATGATGTCATTTGGTAAACTACCCTTAAGGTTAACAAATTGGACCTTATTGTAAAGTGTTACAGAAAAATTCAATAACCAAACACCTCACCCTCCACAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_02284485_02285584.mRNA True 1233 mRNA 0.39 3 2284485 2286129

Neighbor

gene id symbol gene type direction distance location
CI01000009_02233367_02235148 RABL3 coding upstream 48692 2233367 ~ 2235793 (+)
CI01000009_02028234_02100154 PLCL1 coding upstream 184331 2028234 ~ 2100154 (+)
CI01000009_01993176_01999494 MOBL3, MOB4.S, HSPE1, MOB3, HSPE1-MOB4, MOB4 coding upstream 284612 1993176 ~ 1999873 (+)
CI01000009_01990700_01991267 HSP10, HSPE1 coding upstream 293098 1990700 ~ 1991387 (+)
CI01000009_01966898_01976924 COQ10B coding upstream 306751 1966898 ~ 1977734 (+)
CI01000009_02375481_02385887 NA coding downstream 88947 2375076 ~ 2386001 (+)
CI01000009_02398010_02399639 NA coding downstream 109936 2396065 ~ 2399752 (+)
CI01000009_02426085_02433745 CNGA4 coding downstream 139446 2425575 ~ 2433795 (+)
CI01000009_02449805_02450173 NHLH2 coding downstream 161868 2447997 ~ 2450356 (+)
CI01000009_02479541_02488142 VANGL1 coding downstream 193412 2479541 ~ 2488759 (+)
G51318 NA non-coding upstream 42153 2242125 ~ 2242332 (+)
G51267 NA non-coding upstream 55381 2227654 ~ 2229104 (+)
G51294 NA non-coding upstream 57026 2226894 ~ 2227459 (+)
G51311 NA non-coding upstream 73173 2211083 ~ 2211312 (+)
G51261 NA non-coding upstream 132098 2151887 ~ 2152387 (+)
G51347 NA non-coding downstream 37138 2323267 ~ 2323857 (+)
G51358 NA non-coding downstream 82053 2368182 ~ 2368414 (+)
G51270 NA non-coding downstream 113649 2399778 ~ 2400894 (+)
G51272 NA non-coding downstream 114904 2401033 ~ 2401367 (+)
G51354 NA non-coding downstream 129571 2415700 ~ 2425283 (+)
CI01000009_01897343_01919208 PIKFYVE other upstream 383059 1897343 ~ 1919516 (+)
G51122 NA other upstream 602519 1680146 ~ 1681966 (+)
CI01000009_01431700_01434463 NA other upstream 846130 1429873 ~ 1435328 (+)
G50920 NA other upstream 1514252 769841 ~ 770233 (+)
CI01000009_00094836_00095813 NA other upstream 2188698 94371 ~ 97230 (+)
G51529 NA other downstream 775904 3062033 ~ 3062587 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other downstream 916643 3202207 ~ 3208984 (+)
G53388 NA other downstream 3236113 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 3574173 5931718 ~ 5943899 (+)
G53651 NA other downstream 3959435 6245564 ~ 6248392 (+)

Expression


Co-expression Network