G51261


Basic Information

Item Value
gene id G51261
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 2151887 ~ 2152387 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU58392
AAAATGTTACATATTAATTCACATATGTTTTTTGTACACAAAAAATGGCCATTAATAGAATTACTCACTTTTAAACTGAAAACAATTAATTATATGGTTGAAGCTTGCTTATATTTCACAAGTTTTGACAGTCAAGGGTAATCATGGAGAAACTTTTGAGATGTGCAAAAAAACTATTTCATATATTCATATATATGCGCATACACTATATTGCCAAAAGTATTGGGACACCCCTCCAAATCATTGAATTCAGGTGTTCCAATCACTTCCATGGCCACAGGTGTATAAAATCAAGCACCTAGGCATGCAGACTGCTTCTACAAACATATGTGAAAGAATGGGTCGCTCTCAGGAGCTCAGTGAATTCAAGCGTGGTACCGTGATAGGTTACCACCTGTGCAATAAGTCCATTCGTGAAATTTCCTCACTACTAAATATTCCACAGTCAACTGTTAGTGGTATCATAACAAAGTGGAAGCAATTGGGAACAACAGCAACTCA

Function

NR:

description
PREDICTED: eukaryotic translation initiation factor 4B isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58392 True 501 lncRNA 0.47 1 2151887 2152387

Neighbor

gene id symbol gene type direction distance location
CI01000009_02028234_02100154 PLCL1 coding upstream 51733 2028234 ~ 2100154 (+)
CI01000009_01993176_01999494 MOBL3, MOB4.S, HSPE1, MOB3, HSPE1-MOB4, MOB4 coding upstream 152014 1993176 ~ 1999873 (+)
CI01000009_01990700_01991267 HSP10, HSPE1 coding upstream 160500 1990700 ~ 1991387 (+)
CI01000009_01966898_01976924 COQ10B coding upstream 174153 1966898 ~ 1977734 (+)
CI01000009_01897343_01919208 PIKFYVE coding upstream 232371 1897343 ~ 1919516 (+)
CI01000009_02233367_02235148 RABL3 coding downstream 80980 2233367 ~ 2235793 (+)
CI01000009_02284485_02285584 NA coding downstream 132098 2284485 ~ 2286129 (+)
CI01000009_02375481_02385887 NA coding downstream 222689 2375076 ~ 2386001 (+)
CI01000009_02398010_02399639 NA coding downstream 243678 2396065 ~ 2399752 (+)
CI01000009_02426085_02433745 CNGA4 coding downstream 273188 2425575 ~ 2433795 (+)
G51238 NA non-coding upstream 35166 2099278 ~ 2116721 (+)
G51185 NA non-coding upstream 106243 2038469 ~ 2045644 (+)
G51228 NA non-coding upstream 127428 2024109 ~ 2024459 (+)
G51175 NA non-coding upstream 191170 1959260 ~ 1960717 (+)
G51216 NA non-coding upstream 198524 1953141 ~ 1953363 (+)
G51311 NA non-coding downstream 58696 2211083 ~ 2211312 (+)
G51294 NA non-coding downstream 74507 2226894 ~ 2227459 (+)
G51267 NA non-coding downstream 75267 2227654 ~ 2229104 (+)
G51318 NA non-coding downstream 89738 2242125 ~ 2242332 (+)
G51265 NA non-coding downstream 90322 2242709 ~ 2363171 (+)
G51122 NA other upstream 469921 1680146 ~ 1681966 (+)
CI01000009_01431700_01434463 NA other upstream 713532 1429873 ~ 1435328 (+)
G50920 NA other upstream 1381654 769841 ~ 770233 (+)
CI01000009_00094836_00095813 NA other upstream 2056100 94371 ~ 97230 (+)
G51274 NA other downstream 102712 2255099 ~ 2350486 (+)
G51529 NA other downstream 909646 3062033 ~ 3062587 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other downstream 1050385 3202207 ~ 3208984 (+)
G53388 NA other downstream 3369855 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 3707915 5931718 ~ 5943899 (+)

Expression


Co-expression Network