Gene
RNA
| Item | Value |
|---|---|
| gene id | G51347 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 2323267 ~ 2323857 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU58506 | True | 543 | lncRNA | 0.46 | 2 | 2323267 | 2323857 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_02284485_02285584 | NA | coding | upstream | 37138 | 2284485 ~ 2286129 (+) |
| CI01000009_02233367_02235148 | RABL3 | coding | upstream | 87474 | 2233367 ~ 2235793 (+) |
| CI01000009_02028234_02100154 | PLCL1 | coding | upstream | 223113 | 2028234 ~ 2100154 (+) |
| CI01000009_01993176_01999494 | MOBL3, MOB4.S, HSPE1, MOB3, HSPE1-MOB4, MOB4 | coding | upstream | 323394 | 1993176 ~ 1999873 (+) |
| CI01000009_01990700_01991267 | HSP10, HSPE1 | coding | upstream | 331880 | 1990700 ~ 1991387 (+) |
| CI01000009_02375481_02385887 | NA | coding | downstream | 51219 | 2375076 ~ 2386001 (+) |
| CI01000009_02398010_02399639 | NA | coding | downstream | 72208 | 2396065 ~ 2399752 (+) |
| CI01000009_02426085_02433745 | CNGA4 | coding | downstream | 101718 | 2425575 ~ 2433795 (+) |
| CI01000009_02449805_02450173 | NHLH2 | coding | downstream | 124140 | 2447997 ~ 2450356 (+) |
| CI01000009_02479541_02488142 | VANGL1 | coding | downstream | 155684 | 2479541 ~ 2488759 (+) |
| G51318 | NA | non-coding | upstream | 80935 | 2242125 ~ 2242332 (+) |
| G51267 | NA | non-coding | upstream | 94163 | 2227654 ~ 2229104 (+) |
| G51294 | NA | non-coding | upstream | 95808 | 2226894 ~ 2227459 (+) |
| G51311 | NA | non-coding | upstream | 111955 | 2211083 ~ 2211312 (+) |
| G51261 | NA | non-coding | upstream | 170880 | 2151887 ~ 2152387 (+) |
| G51358 | NA | non-coding | downstream | 44325 | 2368182 ~ 2368414 (+) |
| G51270 | NA | non-coding | downstream | 75921 | 2399778 ~ 2400894 (+) |
| G51272 | NA | non-coding | downstream | 77176 | 2401033 ~ 2401367 (+) |
| G51354 | NA | non-coding | downstream | 91843 | 2415700 ~ 2425283 (+) |
| G51368 | NA | non-coding | downstream | 104265 | 2428122 ~ 2428322 (+) |
| CI01000009_01897343_01919208 | PIKFYVE | other | upstream | 421841 | 1897343 ~ 1919516 (+) |
| G51122 | NA | other | upstream | 641301 | 1680146 ~ 1681966 (+) |
| CI01000009_01431700_01434463 | NA | other | upstream | 884912 | 1429873 ~ 1435328 (+) |
| G50920 | NA | other | upstream | 1553034 | 769841 ~ 770233 (+) |
| CI01000009_00094836_00095813 | NA | other | upstream | 2227480 | 94371 ~ 97230 (+) |
| G51529 | NA | other | downstream | 738176 | 3062033 ~ 3062587 (+) |
| CI01000009_03202999_03207060 | MPC2, MPC2.S | other | downstream | 878915 | 3202207 ~ 3208984 (+) |
| G53388 | NA | other | downstream | 3198385 | 5522242 ~ 5540638 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | downstream | 3536445 | 5931718 ~ 5943899 (+) |
| G53651 | NA | other | downstream | 3921707 | 6245564 ~ 6248392 (+) |
