G51358


Basic Information

Item Value
gene id G51358
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 2368182 ~ 2368414 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU58522
CGGAAGTTCGCTATTTTACTTTATAAAGTTTTAAATAAGGATAATTGTCCTACACAAATGCATTGATTAGCTTCAGAAGGCCATTATTAACCCCCTGGAGTCGTATGGATTCTTTTTCTTTTTCTTTTTTTTTGTCTTCAGAATTTGGGTTATCATTCACAACCATTATAAACCTTGGAGGACTAAGGATATTTTTAAATATATCTCCGATTGTGTTCGTCTGAAACAAGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58522 True 233 lncRNA 0.32 1 2368182 2368414

Neighbor

gene id symbol gene type direction distance location
CI01000009_02284485_02285584 NA coding upstream 82053 2284485 ~ 2286129 (+)
CI01000009_02233367_02235148 RABL3 coding upstream 132389 2233367 ~ 2235793 (+)
CI01000009_02028234_02100154 PLCL1 coding upstream 268028 2028234 ~ 2100154 (+)
CI01000009_01993176_01999494 MOBL3, MOB4.S, HSPE1, MOB3, HSPE1-MOB4, MOB4 coding upstream 368309 1993176 ~ 1999873 (+)
CI01000009_01990700_01991267 HSP10, HSPE1 coding upstream 376795 1990700 ~ 1991387 (+)
CI01000009_02375481_02385887 NA coding downstream 6662 2375076 ~ 2386001 (+)
CI01000009_02398010_02399639 NA coding downstream 27651 2396065 ~ 2399752 (+)
CI01000009_02426085_02433745 CNGA4 coding downstream 57161 2425575 ~ 2433795 (+)
CI01000009_02449805_02450173 NHLH2 coding downstream 79583 2447997 ~ 2450356 (+)
CI01000009_02479541_02488142 VANGL1 coding downstream 111127 2479541 ~ 2488759 (+)
G51265 NA non-coding upstream 5011 2242709 ~ 2363171 (+)
G51347 NA non-coding upstream 44325 2323267 ~ 2323857 (+)
G51318 NA non-coding upstream 125850 2242125 ~ 2242332 (+)
G51267 NA non-coding upstream 139078 2227654 ~ 2229104 (+)
G51294 NA non-coding upstream 140723 2226894 ~ 2227459 (+)
G51270 NA non-coding downstream 31364 2399778 ~ 2400894 (+)
G51272 NA non-coding downstream 32619 2401033 ~ 2401367 (+)
G51354 NA non-coding downstream 47286 2415700 ~ 2425283 (+)
G51368 NA non-coding downstream 59708 2428122 ~ 2428322 (+)
G51384 NA non-coding downstream 186325 2554739 ~ 2621187 (+)
G51274 NA other upstream 17696 2255099 ~ 2350486 (+)
CI01000009_01897343_01919208 PIKFYVE other upstream 466756 1897343 ~ 1919516 (+)
G51122 NA other upstream 686216 1680146 ~ 1681966 (+)
CI01000009_01431700_01434463 NA other upstream 929827 1429873 ~ 1435328 (+)
G50920 NA other upstream 1597949 769841 ~ 770233 (+)
G51529 NA other downstream 693619 3062033 ~ 3062587 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other downstream 834358 3202207 ~ 3208984 (+)
G53388 NA other downstream 3153828 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 3491888 5931718 ~ 5943899 (+)
G53651 NA other downstream 3877150 6245564 ~ 6248392 (+)

Expression


Co-expression Network