G14338


Basic Information

Item Value
gene id G14338
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 28620714 ~ 28621120 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU19217
TAATTTGTTATGTAGGACAGTATACTCAtatagtggtatgaaaaagtttgggcacccctgatcatttttttttattttcctttataaataacTGGTTGTTCGattcagcaatttcagttaaatatagctttgaataaaaaaaaagactgcacttaaaaatgatgagtttctttgattttaccaaattgaaaacctctggaatataatcaagaggaagatggatgatcacaagctgatcatcaaaccaaactgaactgcttgaatttttacaccaggagtaaagcagcataaagttatcatccaaaagcagtgtgtaagactggtggaggagaacatgatgccaagatgcatgaaaaaaactgtgattaaaaaccagggttattccaccaaatattgatttccgaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19217 True 407 lncRNA 0.35 1 28620714 28621120

Neighbor

gene id symbol gene type direction distance location
fbxl16 fbxl16,LOC107685932,LOC107738613,LOC107568165,LOC107568127,LOC107690242 coding upstream 778658 27799416 ~ 27842056 (+)
LOC103031039 gsg1l,LOC103031039,LOC108436662,LOC107690243,LOC107738642,LOC107685933 coding upstream 872528 27703214 ~ 27748186 (+)
c2h16orf89 cunh16orf89 coding upstream 1017571 27591585 ~ 27603143 (+)
eef2kmt eef2kmt coding upstream 1042654 27573552 ~ 27578060 (+)
LOC111194302 NA coding upstream 1508646 27104032 ~ 27112068 (+)
mettl22 mettl22 coding downstream 44092 28665212 ~ 28694928 (+)
abat abat,LOC107690246,LOC107738621,LOC107685926 coding downstream 76302 28697422 ~ 28748984 (+)
dnase1 dnase1l2 coding downstream 192998 28814118 ~ 28821841 (+)
LOC103022852 arhgdib,gdir2,LOC108432841,LOC107590585,LOC107685923,LOC107568023,LOC106601960 coding downstream 207482 28828602 ~ 28890929 (+)
LOC103022544 pde6g,LOC108432842,LOC107733865,LOC107690252 coding downstream 279903 28901023 ~ 28902504 (+)
G14247 NA non-coding upstream 118567 28500479 ~ 28502147 (+)
G14245 NA non-coding upstream 140411 28479791 ~ 28480303 (+)
G14217 NA non-coding upstream 414069 28201161 ~ 28206645 (+)
G14198 NA non-coding upstream 525754 28004284 ~ 28094960 (+)
G14179 NA non-coding upstream 730682 27812962 ~ 27890032 (+)
G14348 NA non-coding downstream 64176 28685296 ~ 28685750 (+)
G14352 NA non-coding downstream 77144 28698264 ~ 28699214 (+)
G14346 NA non-coding downstream 86176 28707296 ~ 28802417 (+)
G14353 NA non-coding downstream 102272 28723392 ~ 28724706 (+)
G14365 NA non-coding downstream 270786 28891906 ~ 28892162 (+)
rbfox1 rbfox1 other upstream 13625 28112046 ~ 28607089 (+)
LOC103031366 LOC105899914 other upstream 542896 28050129 ~ 28077818 (+)
G14047 NA other upstream 1580185 27009548 ~ 27040529 (+)
LOC103023549 gpr171 other upstream 2825630 25788584 ~ 25795084 (+)
mfrp mfrp other upstream 2947478 25660898 ~ 25673236 (+)
G14444 NA other downstream 507947 29129067 ~ 29129373 (+)
G14480 NA other downstream 774040 29395160 ~ 29398166 (+)
nubp1 nubp1,LOC107690260,LOC107685912 other downstream 1052990 29674110 ~ 29720592 (+)
G14505 NA other downstream 1112185 29733305 ~ 29742723 (+)
G14638 rps15a,MGC114789,RPS15A,LOC107686992 other downstream 1639557 30260677 ~ 30268382 (+)

Expression


Co-expression Network