Gene
RNA
| Item | Value |
|---|---|
| gene id | G85039 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000013 |
| NCBI id | null |
| chromosome length | 12551977 |
| location | 10185111 ~ 10185345 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU96799 | True | 235 | lncRNA | 0.41 | 1 | 10185111 | 10185345 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000013_10127318_10157548 | SEMA3E | coding | downstream | 27563 | 10127196 ~ 10157548 (-) |
| CI01000013_10037048_10083444 | PCLOB | coding | downstream | 101667 | 10037048 ~ 10083444 (-) |
| CI01000013_10014588_10020597 | NA | coding | downstream | 164514 | 10014385 ~ 10020597 (-) |
| CI01000013_09930834_10008344 | CACNA2D1 | coding | downstream | 176605 | 9930537 ~ 10008506 (-) |
| CI01000013_09828630_09852321 | NA | coding | downstream | 332790 | 9827129 ~ 9852321 (-) |
| CI01000013_10218387_10244139 | SEMA3A, SEMA3AB | coding | upstream | 33025 | 10218370 ~ 10244139 (-) |
| CI01000013_10338616_10372320 | SEMA3D | coding | upstream | 153193 | 10338538 ~ 10375156 (-) |
| CI01000013_10540473_10556642 | NA | coding | upstream | 355070 | 10540415 ~ 10556688 (-) |
| CI01000013_10560692_10562065 | NA | coding | upstream | 374952 | 10560297 ~ 10562280 (-) |
| CI01000013_10564288_10569141 | NA | coding | upstream | 378373 | 10563459 ~ 10569290 (-) |
| G84950 | NA | non-coding | downstream | 59363 | 10122882 ~ 10125748 (-) |
| G85018 | NA | non-coding | downstream | 73686 | 10111158 ~ 10111425 (-) |
| G84979 | NA | non-coding | downstream | 309747 | 9875120 ~ 9875364 (-) |
| G84976 | NA | non-coding | downstream | 318279 | 9866341 ~ 9866832 (-) |
| G84974 | NA | non-coding | downstream | 321490 | 9863400 ~ 9863621 (-) |
| G85117 | NA | non-coding | upstream | 209440 | 10394785 ~ 10395051 (-) |
| G85120 | NA | non-coding | upstream | 215201 | 10400546 ~ 10401108 (-) |
| G85155 | NA | non-coding | upstream | 261572 | 10446917 ~ 10447299 (-) |
| G85069 | NA | non-coding | upstream | 286572 | 10471917 ~ 10472508 (-) |
| G85167 | NA | non-coding | upstream | 289149 | 10474494 ~ 10474707 (-) |
| CI01000013_09309438_09335834 | MICAL3A | other | downstream | 862267 | 9307036 ~ 9336077 (-) |
| CI01000013_07339918_07367774 | NA | other | downstream | 2802751 | 7339709 ~ 7367774 (-) |
| CI01000013_05883498_05884071 | CHTF8 | other | downstream | 4300739 | 5882049 ~ 5884071 (-) |
| G81547 | NA | other | downstream | 4441073 | 5739526 ~ 5744038 (-) |
| G81032 | NA | other | downstream | 5434550 | 4748809 ~ 4750561 (-) |
| G85170 | NA | other | upstream | 294516 | 10479861 ~ 10480700 (-) |
| G85188 | NA | other | upstream | 406859 | 10592204 ~ 10595337 (-) |
| G85401 | NA | other | upstream | 849687 | 11035032 ~ 11035466 (-) |
| CI01000013_11596784_11604320 | NA | other | upstream | 1413715 | 11596688 ~ 11604865 (-) |
