Gene
RNA
| Item | Value |
|---|---|
| gene id | G85117 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000013 |
| NCBI id | null |
| chromosome length | 12551977 |
| location | 10394785 ~ 10395051 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU96877 | True | 247 | lncRNA | 0.34 | 2 | 10394785 | 10395051 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000013_10338616_10372320 | SEMA3D | coding | downstream | 19629 | 10338538 ~ 10375156 (-) |
| CI01000013_10218387_10244139 | SEMA3A, SEMA3AB | coding | downstream | 150646 | 10218370 ~ 10244139 (-) |
| CI01000013_10127318_10157548 | SEMA3E | coding | downstream | 237237 | 10127196 ~ 10157548 (-) |
| CI01000013_10037048_10083444 | PCLOB | coding | downstream | 311341 | 10037048 ~ 10083444 (-) |
| CI01000013_10014588_10020597 | NA | coding | downstream | 374188 | 10014385 ~ 10020597 (-) |
| CI01000013_10540473_10556642 | NA | coding | upstream | 145364 | 10540415 ~ 10556688 (-) |
| CI01000013_10560692_10562065 | NA | coding | upstream | 165246 | 10560297 ~ 10562280 (-) |
| CI01000013_10564288_10569141 | NA | coding | upstream | 168667 | 10563459 ~ 10569290 (-) |
| CI01000013_10597504_10610862 | IMPDH1B, IMPDH1, IMPDH1A | coding | upstream | 202453 | 10597504 ~ 10610862 (-) |
| CI01000013_10799938_10806858 | PRPF18 | coding | upstream | 403547 | 10798598 ~ 10806858 (-) |
| G85039 | NA | non-coding | downstream | 209440 | 10185111 ~ 10185345 (-) |
| G84950 | NA | non-coding | downstream | 269037 | 10122882 ~ 10125748 (-) |
| G85018 | NA | non-coding | downstream | 283360 | 10111158 ~ 10111425 (-) |
| G84979 | NA | non-coding | downstream | 519421 | 9875120 ~ 9875364 (-) |
| G84976 | NA | non-coding | downstream | 527953 | 9866341 ~ 9866832 (-) |
| G85120 | NA | non-coding | upstream | 5495 | 10400546 ~ 10401108 (-) |
| G85155 | NA | non-coding | upstream | 51866 | 10446917 ~ 10447299 (-) |
| G85069 | NA | non-coding | upstream | 76866 | 10471917 ~ 10472508 (-) |
| G85167 | NA | non-coding | upstream | 79443 | 10474494 ~ 10474707 (-) |
| G85171 | NA | non-coding | upstream | 91076 | 10486127 ~ 10486350 (-) |
| CI01000013_09309438_09335834 | MICAL3A | other | downstream | 1071941 | 9307036 ~ 9336077 (-) |
| CI01000013_07339918_07367774 | NA | other | downstream | 3012425 | 7339709 ~ 7367774 (-) |
| CI01000013_05883498_05884071 | CHTF8 | other | downstream | 4510413 | 5882049 ~ 5884071 (-) |
| G81547 | NA | other | downstream | 4650747 | 5739526 ~ 5744038 (-) |
| G81032 | NA | other | downstream | 5644224 | 4748809 ~ 4750561 (-) |
| G85170 | NA | other | upstream | 84810 | 10479861 ~ 10480700 (-) |
| G85188 | NA | other | upstream | 197153 | 10592204 ~ 10595337 (-) |
| G85401 | NA | other | upstream | 639981 | 11035032 ~ 11035466 (-) |
| CI01000013_11596784_11604320 | NA | other | upstream | 1204009 | 11596688 ~ 11604865 (-) |
