CI01000050_04430129_04436139


Basic Information

Item Value
gene id CI01000050_04430129_04436139
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 4429979 ~ 4437457 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_04430129_04436139.mRNA
ATTTAAGAGCGATTAGTCTGAGGCGCAGACATCATTAACATGAGTGCTCATTAACCTCACTCTCAACAAATGACAATAATGAATCTGCATTCAGATTCTCTATTTATATTTCATTTACCATAGACTGACTCCCTCCCTGATCTCATCTTTATGCACTACCCCTTGACTGTAGGTGTAGAGAGCGCCCTCTACAGTCTCCTGCTGTCACTTGCCATCTGCATCGCATCAGTAGCTGTGTTTACTGCACATCCACTTCTGCTGCTGCCAATCCTGCTGAGCATTCTGGGTATGGTGTGTCTGGTGGTGGCGGTGATGTATTGGCTCGGGTGGGAGATGGGTGCAGTTGAAGCCATTTCTCTCTCCATATTGGTGGGCTCTTCGGTGGACTATTGCCTGCATCTTGTGGAAGGCTATCTACTGGCGGGGGACCCTGAAACTTCAGGACTGGCTAATCAAAGTTCGGACTCCTCCATCAAACGGCAGCTACGGACCCTTGAAGCAGCCAATCACGTGGGTGTTGCCATAGTTTCTAGTGCCGTCACTACGGTGATTTCAACCATTCCACTCTTTTTTTGTGTCATCGTGCCTTTCGCCAAGTTTGGTCAGATTGTGGCCATCAACACGGCAATTTCCATCGCGTTCACTCTCACGGTCACTACCGCGCTACTGGCGACAATGGGACCCGCCGACTTCACTCGGCCCCCCAGAGCCGTGCTCAAAGCCGCTCTGGCGGTCCTGATCATGGGTGTCTGCGGAGGTCTGCTTTGGTGGACCGGATCACAGTTTGCTCCTGACACACTGATCTAAATCACACGGCGAATCCCTCCTGCACCCGTTTCAGACCGAGGAACCTCATTCCAGGTGGATTTCAAGTGTGCAACTGTGATTTGTTTGTGAGTTGAGACAACATACGTGAACAAGAACTCATTAGGAAGCAAGTCGGGAAAAAATGAAGTATTTAACATATGTGGCACACTGTTAGAAATTAGGAAACCCTGTGTGTGAATAGTGAACAGTCTGCATGAAGGTAGCGAGCCCTGATAGACGTGGGAAATGATGTCGGGCACATTTAGGCGAATAACTCTTTGCTATCATAAATCGATCTGTCAGGGATTTGCATTAATGTACGACCAAAAGAGTTGATTATTCCTTGATGTTTTGTTTTTTATTCACAACCTGAACTGAAGTGACCGAAGTGATGTGAGGACATGTCTTACATTGGTTCAAGCGTGATGAAGCCCTGAAGTCCCTGAAGAGAAGAACATGAATTCTGTGAATTCATCTCGCGTGCGGGAGCAGGACAACACTGAAGGAGAAAGAAAGTCAAAGACGAAGCTACTTTTTCACCGTCCTTGAGGGATGTTGTGACAGCGTTGGTGTTTAACTCGAAAGTGAATTAATTGAACCCCAGATGTAGATGTCCCTACTGTACATTTTGGTTAAAGTCAACAAGAAATGATTCACAAGCCGTTTTAATTTTGCAATGGAACATATTTCTGAGTCATACAGGATATTAGGAAACACAGTAGGGCGGGATTTGGTGCACGTCCTGATTTTGCCGAGTTAGATGCCTTTCTGGGTCAACATATTTTGTTGATCCTGGAACAACATTCCTGTCTGAAAATTTAGTCCCTATCCCTAACCATACCCATAACTTATCCCTAAAATCAGAGGGAAATGATAGGTGAATAGCACAGATGTAAGAGCACCAAACCCTGGTTTTAAGCCTAATCTTGACATAAAGCTGTAAACTTGTCCCTCAAATCTGATTGGTTGATTGGAATTGCAACGTTGATCCAGGAACATGTTCCATCAGAAATCGATTGGATGGTGAAAAGTGAAAGTTTACCCTCCAGTTTATTTCACCCTATCGCAATGCTAAATTGCTAATTGGCTATCGTATAGTCCAAAAAGCCTTGGTTATGGTGGCTGAAACGGAAGAGGAAGGAAACTTATTGTTAACTAAAACTAAAAGTTAAAAATTAAAATGTTTATTTTATAGCTAAAATAAAATAAAATATGATTAGATGAAAAACTTCACTTTAAAAAACTTAAATGAAAATTAGAAATGTTGAAGTACTAAAATTACTTAAACTAAAATAAATAGAAATTAAAGCTAACAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_04430129_04436139.mRNA True 2125 mRNA 0.43 3 4429979 4437457

Neighbor

gene id symbol gene type direction distance location
CI01000050_04406761_04429903 DISP3 coding upstream 76 4406761 ~ 4429903 (+)
CI01000050_04303341_04330327 DNM1L coding upstream 98738 4303341 ~ 4331241 (+)
CI01000050_04281992_04287535 NA coding upstream 142177 4281992 ~ 4287802 (+)
CI01000050_04275924_04277061 NA coding upstream 152332 4275924 ~ 4277647 (+)
CI01000050_04190820_04204792 BIN3 coding upstream 224056 4190820 ~ 4205923 (+)
CI01000050_04591548_04592778 NA coding downstream 152469 4589926 ~ 4593049 (+)
CI01000050_04617015_04691858 ANTXR1A, ANTXRL, ANTXR1 coding downstream 179280 4616737 ~ 4691974 (+)
CI01000050_04700488_04701991 NA coding downstream 262887 4700344 ~ 4702040 (+)
CI01000050_04759894_04762802 NA coding downstream 322437 4759823 ~ 4763101 (+)
CI01000050_04865991_04906702 AGTPBP1 coding downstream 428449 4865906 ~ 4907415 (+)
G214798 NA non-coding upstream 77255 4352335 ~ 4352724 (+)
G214771 NA non-coding upstream 158132 4271588 ~ 4271847 (+)
G214770 NA non-coding upstream 158469 4271265 ~ 4271510 (+)
G214767 NA non-coding upstream 162552 4267104 ~ 4267427 (+)
G214754 NA non-coding upstream 163296 4266368 ~ 4266683 (+)
G214796 NA non-coding downstream 13841 4451298 ~ 4474391 (+)
G214822 NA non-coding downstream 35374 4472831 ~ 4512459 (+)
G214795 NA non-coding downstream 69302 4506759 ~ 4543037 (+)
G214787 NA non-coding downstream 71038 4508495 ~ 4508867 (+)
G214862 NA non-coding downstream 110113 4547570 ~ 4547900 (+)
G214717 NA other upstream 321699 4107582 ~ 4108280 (+)
CI01000050_03938328_03956122 RHOBTB2 other upstream 472935 3931890 ~ 3957044 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other upstream 621240 3805143 ~ 3808870 (+)
CI01000050_02852118_02864754 RNF122 other upstream 1564157 2852118 ~ 2865822 (+)
G212927 NA other upstream 1654846 2774839 ~ 2775133 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 970128 5407585 ~ 5409417 (+)
G215539 NA other downstream 1192153 5629610 ~ 5631203 (+)
G215773 NA other downstream 2223731 6661188 ~ 6665703 (+)

Expression


Co-expression Network