CI01000050_04275924_04277061


Basic Information

Item Value
gene id CI01000050_04275924_04277061
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 4275924 ~ 4277647 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_04275924_04277061.mRNA
GCAAAGAGCAGGAGGCAAGACGTGAACTCGACGGAGGACATAACTTTGAAAAAGATAATTTCACTGCTGTGAAAATCATGTGGTTCAAACTCGCTGTAGTCGCGCTGGTGTTTCTAAGCGCCAGTTGTTCTGCCAGGCAATCTGACCCAAAAGTGCAGGTGTATAGCCGCAACCCTGGAGAGTATGGGAAAGCAAACGTGCTGATCTGCTATGTCAGTGGCTTTCACCCCCCTGACATCACCATTCAGCTCCTCAAGAATGGGGTGGAGATCCCAGGCAGCACACAGACCGACCTGGCCTTCGAAGAGGGCTGGCAGTTCCACCTGACAAAATATGTTGACTTCCTGCCCCAGCCTGGAGAGGAGTACACCTGCAGAGTCCGTCACATGTCGAGTCCCACAAAGTCCTACACGTGGGAAAGTGGTAGAAAGGGTCTGACGTTGGTTTATTTAGGATCTGTTTGAGTATTTCTCACTTTCTTAGATGTCTGTTTATTGGATCTTAGAGTTTAATTCTTCTCCATCATATTTATTATGGCACATGCATAATATAGACTTATCTATCTATCTATCTATCTATCTATCTATCTTATCTACCATCTGTCTAACTATCTGTCTGTCTGTTTGTTGCAGAAATTTTAATATTCTTTCAAAACATTGTGATTATTAATTAAATGAGACTAATGAAATGATATGAATGTTTGTTTTTCTCTCTTGTAGAGCCTGACATGTGAACATACAGGAGTAAGTTCTGATAATATTATTATTAGTTTTGGGGAAAAAAAAAAAAAGCTTGAATGTTTGATAATGGTAATTGTTGTTTTTGTGATTTACATAAAGCATACTTTATGTAATTAAGCATATTTTGTAAAAAAAAAAAAAAAAAAAAAAAATTGGTTAATGTATTTCAGTTACTGTATTTTAAAACATATTGTTAGCAGAATCATTTATCAGGAACTTTGTTATTTTTTTCCCCCCACAGATTCCTGAAAACAGCAGTTCATCCCCACTTCCATTTTCTCCAAAACTTAAACTTAAGCATCTGCTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_04275924_04277061.mRNA True 1050 mRNA 0.38 3 4275924 4277647

Neighbor

gene id symbol gene type direction distance location
CI01000050_04190820_04204792 BIN3 coding upstream 70001 4190820 ~ 4205923 (+)
CI01000050_04159232_04161131 NA coding upstream 114793 4159011 ~ 4161131 (+)
CI01000050_04122649_04127014 EGR3 coding upstream 148879 4122649 ~ 4127045 (+)
CI01000050_03989489_04121180 NA coding upstream 154531 3988257 ~ 4121393 (+)
CI01000050_03938328_03956122 RHOBTB2 coding upstream 319070 3931890 ~ 3957044 (+)
CI01000050_04281992_04287535 NA coding downstream 4345 4281992 ~ 4287802 (+)
CI01000050_04303341_04330327 DNM1L coding downstream 25694 4303341 ~ 4331241 (+)
CI01000050_04406761_04429903 DISP3 coding downstream 129114 4406761 ~ 4429903 (+)
CI01000050_04430129_04436139 NA coding downstream 152332 4429979 ~ 4437457 (+)
CI01000050_04591548_04592778 NA coding downstream 312279 4589926 ~ 4593049 (+)
G214771 NA non-coding upstream 4077 4271588 ~ 4271847 (+)
G214770 NA non-coding upstream 4414 4271265 ~ 4271510 (+)
G214767 NA non-coding upstream 8497 4267104 ~ 4267427 (+)
G214754 NA non-coding upstream 9241 4266368 ~ 4266683 (+)
G214798 NA non-coding downstream 74688 4352335 ~ 4352724 (+)
G214796 NA non-coding downstream 173651 4451298 ~ 4474391 (+)
G214822 NA non-coding downstream 195184 4472831 ~ 4512459 (+)
G214795 NA non-coding downstream 229112 4506759 ~ 4543037 (+)
G214787 NA non-coding downstream 230848 4508495 ~ 4508867 (+)
G214717 NA other upstream 167644 4107582 ~ 4108280 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other upstream 467185 3805143 ~ 3808870 (+)
CI01000050_02852118_02864754 RNF122 other upstream 1410102 2852118 ~ 2865822 (+)
G212927 NA other upstream 1500791 2774839 ~ 2775133 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 1129938 5407585 ~ 5409417 (+)
G215539 NA other downstream 1351963 5629610 ~ 5631203 (+)
G215773 NA other downstream 2383541 6661188 ~ 6665703 (+)

Expression


Co-expression Network