CI01000050_04159232_04161131


Basic Information

Item Value
gene id CI01000050_04159232_04161131
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 4159011 ~ 4161131 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_04159232_04161131.mRNA
CTATAAAGGAAACACATTTTTCAGTCCTGTTACAGTGAGTAACATGTGATATAGCTGAGATGATGTGCTCCACACAGCTGAGCTGCACTTGCTTCATCATTCCTTCTCCACATGGAGGCACATCAGCGGTGTATGTGCAGGTTACATATATTAACAGACATAGACCTTTTGTCTATAAGTTAACAAAAGGTCAAACGTCTTCAGCTCGCAAGTATATCGAAATGCCTTCCATGCTGTCGGCAGGTCAGAAATCTTTCGAATCCGTAAGATGCCAGGCTAAACACCTGCAAAAGAACAAAGATTTCCAGCACCGCTTCACAACTTTGTTCCGTGCAGCAATGTCTAAAGCAGCAGTGAAGATCTCAGGGGACTTGTTGAGTAATCCGTTGTGTGAGCAGGATCAAGCTTTCCTTGAATCCATGAACGCTCTGGATACAGCCATGAAGAGAATGGATGCTTTCAATCAGGAGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_04159232_04161131.mRNA True 473 mRNA 0.44 2 4159011 4161131

Neighbor

gene id symbol gene type direction distance location
CI01000050_04122649_04127014 EGR3 coding upstream 31966 4122649 ~ 4127045 (+)
CI01000050_03989489_04121180 NA coding upstream 37618 3988257 ~ 4121393 (+)
CI01000050_03938328_03956122 RHOBTB2 coding upstream 202157 3931890 ~ 3957044 (+)
CI01000050_03814516_03818892 NA coding upstream 340072 3813420 ~ 3818939 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 coding upstream 350141 3805143 ~ 3808870 (+)
CI01000050_04190820_04204792 BIN3 coding downstream 29689 4190820 ~ 4205923 (+)
CI01000050_04275924_04277061 NA coding downstream 114793 4275924 ~ 4277647 (+)
CI01000050_04281992_04287535 NA coding downstream 120861 4281992 ~ 4287802 (+)
CI01000050_04303341_04330327 DNM1L coding downstream 142210 4303341 ~ 4331241 (+)
CI01000050_04406761_04429903 DISP3 coding downstream 245630 4406761 ~ 4429903 (+)
G214727 NA non-coding upstream 41902 4116809 ~ 4117109 (+)
G214725 NA non-coding upstream 43410 4115366 ~ 4115601 (+)
G214719 NA non-coding upstream 49121 4109495 ~ 4109890 (+)
G214754 NA non-coding downstream 105237 4266368 ~ 4266683 (+)
G214767 NA non-coding downstream 105973 4267104 ~ 4267427 (+)
G214770 NA non-coding downstream 110134 4271265 ~ 4271510 (+)
G214771 NA non-coding downstream 110457 4271588 ~ 4271847 (+)
G214798 NA non-coding downstream 191204 4352335 ~ 4352724 (+)
G214717 NA other upstream 50731 4107582 ~ 4108280 (+)
CI01000050_02852118_02864754 RNF122 other upstream 1293189 2852118 ~ 2865822 (+)
G212927 NA other upstream 1383878 2774839 ~ 2775133 (+)
CI01000050_04591548_04592778 NA other downstream 430424 4589926 ~ 4593049 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 1246454 5407585 ~ 5409417 (+)
G215539 NA other downstream 1468479 5629610 ~ 5631203 (+)
G215773 NA other downstream 2500057 6661188 ~ 6665703 (+)

Expression


Co-expression Network