G214719


Basic Information

Item Value
gene id G214719
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 4109495 ~ 4109890 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU243618
GGGAAACTGACATCTTTTCCTGTATCTTACATAGTTGTGGAAGATAATTCCACCAATTTAGAGGCAAAGTATGGCACGGTAACAGAATTGACACAAGATTTATGGAAACACATTTTTATAAGATAAAAGTTATTTTTAAACAATTTAATGTTGTAGAATTAGGAAAATTATTATTTGGGGCTTTTTTAAATAAAATATTACCAAAAGAAAAGTAAAATAAAATATTTTGATTACACAGTGATACATGATGGAAAAAAAAAAATACACTAATTCGGACAACAAGAAATCATGATTTTCAGCTATATAACACACTTTTTACAGAAAATATTATATTCTTATGGCCTGTAACATATTGTGATCCATGACAATGAGTGAAAAATTATTAAAATAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU243618 True 396 lncRNA 0.26 1 4109495 4109890

Neighbor

gene id symbol gene type direction distance location
CI01000050_03938328_03956122 RHOBTB2 coding upstream 152641 3931890 ~ 3957044 (+)
CI01000050_03814516_03818892 NA coding upstream 290556 3813420 ~ 3818939 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 coding upstream 300625 3805143 ~ 3808870 (+)
CI01000050_03679119_03683710 NA coding upstream 425326 3679080 ~ 3684169 (+)
CI01000050_03641769_03645039 NA coding upstream 464386 3639187 ~ 3645109 (+)
CI01000050_04122649_04127014 EGR3 coding downstream 12759 4122649 ~ 4127045 (+)
CI01000050_04159232_04161131 NA coding downstream 49121 4159011 ~ 4161131 (+)
CI01000050_04190820_04204792 BIN3 coding downstream 80930 4190820 ~ 4205923 (+)
CI01000050_04275924_04277061 NA coding downstream 166034 4275924 ~ 4277647 (+)
CI01000050_04281992_04287535 NA coding downstream 172102 4281992 ~ 4287802 (+)
G214575 NA non-coding upstream 148130 3907109 ~ 3961365 (+)
G214571 NA non-coding upstream 192334 3912797 ~ 3917161 (+)
G214632 NA non-coding upstream 204414 3904775 ~ 3905081 (+)
G214605 NA non-coding upstream 205767 3873155 ~ 3903728 (+)
G214725 NA non-coding downstream 5476 4115366 ~ 4115601 (+)
G214727 NA non-coding downstream 6919 4116809 ~ 4117109 (+)
CI01000050_03989489_04121180 NA non-coding downstream 11161 3988257 ~ 4121393 (+)
G214754 NA non-coding downstream 156478 4266368 ~ 4266683 (+)
G214767 NA non-coding downstream 157214 4267104 ~ 4267427 (+)
G214717 NA other upstream 1215 4107582 ~ 4108280 (+)
CI01000050_02852118_02864754 RNF122 other upstream 1243673 2852118 ~ 2865822 (+)
G212927 NA other upstream 1334362 2774839 ~ 2775133 (+)
CI01000050_04591548_04592778 NA other downstream 481665 4589926 ~ 4593049 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 1297695 5407585 ~ 5409417 (+)
G215539 NA other downstream 1519720 5629610 ~ 5631203 (+)
G215773 NA other downstream 2551298 6661188 ~ 6665703 (+)

Expression


Co-expression Network