Gene
RNA
| Item | Value |
|---|---|
| gene id | G214727 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000050 |
| NCBI id | null |
| chromosome length | 7556436 |
| location | 4116809 ~ 4117109 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU243626 | True | 301 | lncRNA | 0.35 | 1 | 4116809 | 4117109 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000050_03938328_03956122 | RHOBTB2 | coding | upstream | 159955 | 3931890 ~ 3957044 (+) |
| CI01000050_03814516_03818892 | NA | coding | upstream | 297870 | 3813420 ~ 3818939 (+) |
| CI01000050_03807697_03808793 | CLCN5B, CLCN5 | coding | upstream | 307939 | 3805143 ~ 3808870 (+) |
| CI01000050_03679119_03683710 | NA | coding | upstream | 432640 | 3679080 ~ 3684169 (+) |
| CI01000050_03641769_03645039 | NA | coding | upstream | 471700 | 3639187 ~ 3645109 (+) |
| CI01000050_04122649_04127014 | EGR3 | coding | downstream | 5540 | 4122649 ~ 4127045 (+) |
| CI01000050_04159232_04161131 | NA | coding | downstream | 41902 | 4159011 ~ 4161131 (+) |
| CI01000050_04190820_04204792 | BIN3 | coding | downstream | 73711 | 4190820 ~ 4205923 (+) |
| CI01000050_04275924_04277061 | NA | coding | downstream | 158815 | 4275924 ~ 4277647 (+) |
| CI01000050_04281992_04287535 | NA | coding | downstream | 164883 | 4281992 ~ 4287802 (+) |
| G214725 | NA | non-coding | upstream | 1208 | 4115366 ~ 4115601 (+) |
| G214719 | NA | non-coding | upstream | 6919 | 4109495 ~ 4109890 (+) |
| G214575 | NA | non-coding | upstream | 155444 | 3907109 ~ 3961365 (+) |
| G214571 | NA | non-coding | upstream | 199648 | 3912797 ~ 3917161 (+) |
| CI01000050_03989489_04121180 | NA | non-coding | downstream | 3942 | 3988257 ~ 4121393 (+) |
| G214754 | NA | non-coding | downstream | 149259 | 4266368 ~ 4266683 (+) |
| G214767 | NA | non-coding | downstream | 149995 | 4267104 ~ 4267427 (+) |
| G214770 | NA | non-coding | downstream | 154156 | 4271265 ~ 4271510 (+) |
| G214771 | NA | non-coding | downstream | 154479 | 4271588 ~ 4271847 (+) |
| G214717 | NA | other | upstream | 8529 | 4107582 ~ 4108280 (+) |
| CI01000050_02852118_02864754 | RNF122 | other | upstream | 1250987 | 2852118 ~ 2865822 (+) |
| G212927 | NA | other | upstream | 1341676 | 2774839 ~ 2775133 (+) |
| CI01000050_04591548_04592778 | NA | other | downstream | 474446 | 4589926 ~ 4593049 (+) |
| CI01000050_05407682_05409108 | FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A | other | downstream | 1290476 | 5407585 ~ 5409417 (+) |
| G215539 | NA | other | downstream | 1512501 | 5629610 ~ 5631203 (+) |
| G215773 | NA | other | downstream | 2544079 | 6661188 ~ 6665703 (+) |
