Gene
RNA
| Item | Value |
|---|---|
| gene id | G214767 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000050 |
| NCBI id | null |
| chromosome length | 7556436 |
| location | 4267104 ~ 4267427 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU243671 | True | 324 | lncRNA | 0.39 | 1 | 4267104 | 4267427 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000050_04190820_04204792 | BIN3 | coding | upstream | 61181 | 4190820 ~ 4205923 (+) |
| CI01000050_04159232_04161131 | NA | coding | upstream | 105973 | 4159011 ~ 4161131 (+) |
| CI01000050_04122649_04127014 | EGR3 | coding | upstream | 140059 | 4122649 ~ 4127045 (+) |
| CI01000050_03989489_04121180 | NA | coding | upstream | 145711 | 3988257 ~ 4121393 (+) |
| CI01000050_03938328_03956122 | RHOBTB2 | coding | upstream | 310250 | 3931890 ~ 3957044 (+) |
| CI01000050_04275924_04277061 | NA | coding | downstream | 8497 | 4275924 ~ 4277647 (+) |
| CI01000050_04281992_04287535 | NA | coding | downstream | 14565 | 4281992 ~ 4287802 (+) |
| CI01000050_04303341_04330327 | DNM1L | coding | downstream | 35914 | 4303341 ~ 4331241 (+) |
| CI01000050_04406761_04429903 | DISP3 | coding | downstream | 139334 | 4406761 ~ 4429903 (+) |
| CI01000050_04430129_04436139 | NA | coding | downstream | 162552 | 4429979 ~ 4437457 (+) |
| G214754 | NA | non-coding | upstream | 421 | 4266368 ~ 4266683 (+) |
| G214727 | NA | non-coding | upstream | 149995 | 4116809 ~ 4117109 (+) |
| G214725 | NA | non-coding | upstream | 151503 | 4115366 ~ 4115601 (+) |
| G214719 | NA | non-coding | upstream | 157214 | 4109495 ~ 4109890 (+) |
| G214770 | NA | non-coding | downstream | 3838 | 4271265 ~ 4271510 (+) |
| G214771 | NA | non-coding | downstream | 4161 | 4271588 ~ 4271847 (+) |
| G214798 | NA | non-coding | downstream | 84908 | 4352335 ~ 4352724 (+) |
| G214796 | NA | non-coding | downstream | 183871 | 4451298 ~ 4474391 (+) |
| G214822 | NA | non-coding | downstream | 205404 | 4472831 ~ 4512459 (+) |
| G214717 | NA | other | upstream | 158824 | 4107582 ~ 4108280 (+) |
| CI01000050_03807697_03808793 | CLCN5B, CLCN5 | other | upstream | 458365 | 3805143 ~ 3808870 (+) |
| CI01000050_02852118_02864754 | RNF122 | other | upstream | 1401282 | 2852118 ~ 2865822 (+) |
| G212927 | NA | other | upstream | 1491971 | 2774839 ~ 2775133 (+) |
| CI01000050_04591548_04592778 | NA | other | downstream | 324128 | 4589926 ~ 4593049 (+) |
| CI01000050_05407682_05409108 | FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A | other | downstream | 1140158 | 5407585 ~ 5409417 (+) |
| G215539 | NA | other | downstream | 1362183 | 5629610 ~ 5631203 (+) |
| G215773 | NA | other | downstream | 2393761 | 6661188 ~ 6665703 (+) |
