G214770


Basic Information

Item Value
gene id G214770
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 4271265 ~ 4271510 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU243674
CAGACAGTGTGAACACCCCTTACTACAGTTGTCCAGTAGCGAGTAGCGACGCCTGCTCTTTGTGCTATGTCCAGTGATTTAACCCTCTGGTGTTGTTCAGTCATTTTAGATCGAAATAAAAATGTTTTCACTAAAAATGCTTTGATAAATAAAGATGTTTTGTCCGCTACTTCATCAGAATAGTATGAAACTTTTAAACTATGAAACTATGGTATAAGACTTTTGTGGCAGTCGCTATGTGACCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU243674 True 246 lncRNA 0.38 1 4271265 4271510

Neighbor

gene id symbol gene type direction distance location
CI01000050_04190820_04204792 BIN3 coding upstream 65342 4190820 ~ 4205923 (+)
CI01000050_04159232_04161131 NA coding upstream 110134 4159011 ~ 4161131 (+)
CI01000050_04122649_04127014 EGR3 coding upstream 144220 4122649 ~ 4127045 (+)
CI01000050_03989489_04121180 NA coding upstream 149872 3988257 ~ 4121393 (+)
CI01000050_03938328_03956122 RHOBTB2 coding upstream 314411 3931890 ~ 3957044 (+)
CI01000050_04275924_04277061 NA coding downstream 4414 4275924 ~ 4277647 (+)
CI01000050_04281992_04287535 NA coding downstream 10482 4281992 ~ 4287802 (+)
CI01000050_04303341_04330327 DNM1L coding downstream 31831 4303341 ~ 4331241 (+)
CI01000050_04406761_04429903 DISP3 coding downstream 135251 4406761 ~ 4429903 (+)
CI01000050_04430129_04436139 NA coding downstream 158469 4429979 ~ 4437457 (+)
G214767 NA non-coding upstream 3838 4267104 ~ 4267427 (+)
G214754 NA non-coding upstream 4582 4266368 ~ 4266683 (+)
G214727 NA non-coding upstream 154156 4116809 ~ 4117109 (+)
G214725 NA non-coding upstream 155664 4115366 ~ 4115601 (+)
G214771 NA non-coding downstream 78 4271588 ~ 4271847 (+)
G214798 NA non-coding downstream 80825 4352335 ~ 4352724 (+)
G214796 NA non-coding downstream 179788 4451298 ~ 4474391 (+)
G214822 NA non-coding downstream 201321 4472831 ~ 4512459 (+)
G214795 NA non-coding downstream 235249 4506759 ~ 4543037 (+)
G214717 NA other upstream 162985 4107582 ~ 4108280 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other upstream 462526 3805143 ~ 3808870 (+)
CI01000050_02852118_02864754 RNF122 other upstream 1405443 2852118 ~ 2865822 (+)
G212927 NA other upstream 1496132 2774839 ~ 2775133 (+)
CI01000050_04591548_04592778 NA other downstream 320045 4589926 ~ 4593049 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 1136075 5407585 ~ 5409417 (+)
G215539 NA other downstream 1358100 5629610 ~ 5631203 (+)
G215773 NA other downstream 2389678 6661188 ~ 6665703 (+)

Expression


Co-expression Network