CI01000050_03641769_03645039


Basic Information

Item Value
gene id CI01000050_03641769_03645039
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 3639187 ~ 3645109 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_03641769_03645039.mRNA
ACATATATAGCAGGCAGCCTTGCTTGGCCTAATCAATTTCTCACACTTCATCTACAGGCTCATGCACAGGCAGGAGGCTACCAGAATGGAGCAGCGTTTTTTGCACTATAGGCTTACGTTTTATAATAGGCTTTACAAATATTTATTTTGTTTAAATATTATATGTTCTAAAACATTGTTTAATTATATTAAAATAGTAGGCCTATAGTCTTAGGCCATCATTTTCTGTGTTCATCATTGTTCACGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTACGTTTCTTCATTCGGAATTTCAGATCCATTTACGATCCATTCAGTTATTTCTGAATAAACAAACAACGCAGTTTACATGCTTCTTCCTTGTCGTATTATTCATTAAGATAATAATTAATAAATGCACGCACAATTATGAACTTGATAAATGTTACAGATATGTTTTACTATGCACAAACAAATACCTTTTAACTTACATGTGCAAAATTCAGAATTAAATGAATGTGCTGCAATTTGTACAAAAAGAGAGTCTGTAGTAGCCTACATGTTTTAGCCATTAAATAAGCACATTTAGTTTCAAGTTTAAGTTTTGTTTTGAAGAAAGATTTTCTTTAAAGTGAATTTCGTTTAGTATAAATTGTATCTTAATTTTAATGCATTTTTCATCAACCAATTGCCTGGATTTAATACATAAAAAGCAATATAGCAGACAATATAATAATGATATGGAGGCGCCGGCGCGCCGCGGTCACACACATATTATGTTGAAATAACAATATGTTGAAGTAACATTATTAATAATAATTAATCTTTAAGAATATTTGATTGAATGCTGAATGTTGTGCTTGTTCAATTTAATAAAATTAAAACTTTAATTATGATAATTAAAATAATTGAATATTTAATATTGAGTGACCAATTTTTGCTCATTTATTAATAGTATTTATATATATATATAACTGCGCAGCTCCCCCCTGTAGCCTAAATGATCTAGCACAGTAGCACCTGCGTTAAAAAAAAAAAAATCTGGCGCTGCCCCTGGTTATAACGGCCCACATATTAAAAATGGTCGGGTTTAAATCGGGCTCGGGCTCATAATTACAGTGAACGTGTCGGGCCGGGCCGGGCTCGGACACAACGGGTTTGTTGGGCCCGATCTAAGCTCTAATTCAGACCCCCTTAAATTTTTCACTCTTTGTTATATTGCAGCAATTTGCTAAATTCATTTAAGTTCATTTTTTTCCCTCATTAATGTACACACAGCACCTCATATTGACAGAAAAACACAGAATTGTTGACATTTTTGCAGATTTATTAAAAAATAAAAACTGAAATATCACATGGTCCTAAGTATTCAGACCCTTTGCTGTGACACTCATATATTTAACTCAGGTGCTGTCCATTTCTTCTGATCATCCTTGAGATGGTTCTACACCTTCATTTGAGTCCAGCTGTGTTTGATTGTACTGATTGGACTTGATTAGGAAAGCCACACACCTGTCTATATAAGACCTTCAGCTCACAGTGCATGTCAGAGCAAATGAGAATCATGAGGTCAAAGGAACTGCCTGAAGAGCTCAGAGACAGAATTGTGGCAAGGCACAGATCTGGCCAAGGTTACAAAAAAATGTCTGCTGCACTTAAGGTTCCTAAGAGCACAGTGGCCTCCATAATCCTTAAATGGAAGACGTTTGGGACGACCAGAACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCGGGGGAGAAGAGCCTTGGTGAGAGAGGTAAAGAAGAACCCAAAGATCACTGTGGCTGAGCTCCAGAGATGCAGTCGGGAGATGGGAGAAAGTTGTAGAAAGTCAACCATCACTGCAGCCCTCCACCAGTCGGGGTTTTATGGCAGAGTGGCCCGACGGAAGCCTCTCCTCAGTGCAAGACACATGAAAGCCCGCATGGAGGACTCCAAGATGGACAATAAGATTCTCTGGTCTGATGAGACCAAGATAGAACTTTTTGGCCTTAATTCTAAGCGGTATGTGTGGAGAAAACCAGGCACTGCTCATCACCTGTCCAATACAGTCCCAACAGTGAAGCATGGTGGTGGCAGCATCATGCTGTGGGGGTGTTTTTCAGCTGCAGGGACAGGACGACTGGTTGCAATCGAGGGAAAGATGAATGCGGCCAAGTACAGGGATATCCTGGACGAAAACCTTCTCCAGGGTGCTCAGGACCTCAGACTGGGCCGAAGGTTTACCTTCCAACAAGACAATGACCCTAAGCACACAGCTAAAATAACGAACGAGTGGCTTCACAACAACTCCGTGACTGTTCTTGAATGGCCCAGCCAGAGCCCTGACTTAAAACCAAGGCATTGTTAGAACCAAGCAAAGACTCAGAGAGCTGTATTGGTGGCCGGGTATGGATTCCCAGGTTGAGACAGCCATCAAATCATGCATTACGTGTCAAACTCATGACAAGTCAGCAGTCGTTCGCACTCCGCCACTCCAGCCTGTACCCCTCCCAAATGGAGCATGGGAGAAACTCGCTATAGACATTGTGGGGCCCTTTGACAAAGCTCCAGCAGAATGTCGTTTTGCTGTAACTTTAGTGGACTACTTTAGTAACCCGAAGGAGCTGATCTCAGATCACGGCTCTCAATTCATGTCATGTGAGTTTGAAATGTTTCTTCAAAACCGAGGAATTATGCATCGAACTTCATCTGTGTATTATCCTCGTGCCAATGGAGAGGTCGAACGTTTTAACCGTACTTTGAAGCACGCATTGCTAACTGCTTCCCTGGAAGGCAAAGGATGGAAAGAATTCACAAGGGAATTCTTACAAGCATACCGTGCTACACCTAATTCGACTACTCAGCGTTCACCTGCTGAATTGTTACATGCAAGGCCGATGCGCACTAAACTTCACATCTCAGGAGTACAGAAACTGCAGCATCTTCAGCAACCATGTGTGCAGAACATTGTGGATCGAGTGAAATACATGCAGAAGAGCTCCAAAACATACACTGATCGCAAGCGTGGGGCGACGGAAGTGTCATTCAAACAAGGATCTTTTGTTCGAGTGAAGCGACCAGGTATCCTTCCTAAGCTCCAATCTGCATTTTCCAAACCATTGAAAGTACTGCAAAAGACTGGTCCTTACACTTACAAACTGTCTGATGGGCGTACTTGGAATGCTTCTCACCTCACACCTTTCTCTTATGGGAAGGAGGAGAGTGGGGTACAGGAACTGGCTAACTTTGATTATGACTGTAAAATGCAAACTGTACCAGTGACTCAGCCGGAAAGACAGATCACACACTGCCAGAGCTACAGGGACTTCAGCACTCACATCCAGTCTGAAACAGACACTTTACATGATGATGATATGCATCACAAAAGCAAAATGAAGCTTCTGAAAAACAATAGAATAATATTCTTGAAGTAACTGCTGGCCTATATAAGAAAGACTGGGCCATCAGAACAATGCTTTAAAGGTTTATGAACTGTATTATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_03641769_03645039.mRNA True 3678 mRNA 0.38 3 3639187 3645109

Neighbor

gene id symbol gene type direction distance location
CI01000050_03599274_03618237 SLC25A37 coding upstream 20147 3599274 ~ 3619040 (+)
CI01000050_03573096_03586434 ENTPD4 coding upstream 51876 3573096 ~ 3587311 (+)
CI01000050_03557372_03567755 CHMP7 coding upstream 71208 3557327 ~ 3567979 (+)
CI01000050_03552033_03552887 NA coding upstream 86264 3551122 ~ 3552923 (+)
CI01000050_03528076_03531738 NA coding upstream 106577 3527843 ~ 3532610 (+)
CI01000050_03679119_03683710 NA coding downstream 33971 3679080 ~ 3684169 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 coding downstream 162588 3805143 ~ 3808870 (+)
CI01000050_03814516_03818892 NA coding downstream 168311 3813420 ~ 3818939 (+)
CI01000050_03938328_03956122 RHOBTB2 coding downstream 293219 3931890 ~ 3957044 (+)
CI01000050_03989489_04121180 NA coding downstream 343148 3988257 ~ 4121393 (+)
G213113 NA non-coding upstream 88607 3550198 ~ 3550580 (+)
G213074 NA non-coding upstream 94076 3446464 ~ 3545111 (+)
G213019 NA non-coding upstream 427333 3211584 ~ 3211854 (+)
G213016 NA non-coding upstream 437545 3199786 ~ 3201642 (+)
G213000 NA non-coding upstream 448448 3190519 ~ 3190739 (+)
G213153 NA non-coding downstream 26783 3671892 ~ 3672877 (+)
G214496 NA non-coding downstream 83424 3728533 ~ 3728810 (+)
G214500 NA non-coding downstream 86859 3731968 ~ 3732173 (+)
G214501 NA non-coding downstream 93082 3738191 ~ 3738542 (+)
G214503 NA non-coding downstream 107933 3753042 ~ 3753268 (+)
CI01000050_02852118_02864754 RNF122 other upstream 773365 2852118 ~ 2865822 (+)
G212927 NA other upstream 864054 2774839 ~ 2775133 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 1941779 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 2339581 1296365 ~ 1298255 (+)
G212184 NA other upstream 3204981 433684 ~ 434206 (+)
G214717 NA other downstream 462473 4107582 ~ 4108280 (+)
CI01000050_04591548_04592778 NA other downstream 946446 4589926 ~ 4593049 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 1762476 5407585 ~ 5409417 (+)

Expression


Co-expression Network