CI01000050_03528076_03531738


Basic Information

Item Value
gene id CI01000050_03528076_03531738
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 3527843 ~ 3532610 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_03528076_03531738.mRNA
GTATTAATACTCTTTTCAGCTATGTTAAGACTACATCTCTTAAAGCAGGGCTCTCTGGCTATCATTTCAGTAATGTTTAATATCCTGGCAATGCATACATTAATCATTTGTCTGTTTCAAAGATGTCAGGGGAAAAGCAAAAGAGTATTATTTAATTCTGGGCACCAAAGGGTCAGCCCCCTAAAAAGGTTGCCAGATCAGTGGAGGAGACAGTGGAAGAGGTGGAAGCAGAGATGGTGGAGAAGACCCTAAGGGAGACAGTTGTGGAGAAAGTAGAAGAGACCATAGAGGAAACAGTGGACAAGACAGGGAAGAAGAATGAAGCATTAAGTGGAACAGCCACCAGGTGTACTTTTAAAAGACTTCCTCACACCTCAGTCATACAACAAAAAGGCGTCATGCCTCAGACTAAAAGGCTTCTTTCATCGGACAAAACGGCATCGCGCCTCAGACTGAAAGGCTTCAGGTCTCAGGAAAAACAACGTCAGGTGTCAGGTCTCGTACAATTAGGCATCGAACGAAACAGGCTCAGACCAAAAGGCTTCAGAAGAAAAGGCATCGGATGAAACGGACTCAGACAAAAAGGCATCGGGCTAAAAGGCATCAGGTTTTTTTTTTTTTTTTTTTTTTTTTGTATTGCCTAACTTTCTATTGGCTTTTATCCCATCATAATGCCGTCCTTCAGTTGTCTTTTTCTTTACTGTTACTATTCCCAAATTGATGTAAGATGTGTGTGCGTGCATGTTAATTATGTAGAATCTATCTGATGATGGTATTCATGTAGGCTATTTATAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAACATACCGATTTTCACATTGGTCTGCAGAAAAACAGCAACGGGCTGAATGAAAATGTAAAATGTGACTCTTCCATCCAGATAGTGGTATTCTGTTTTTATTGTTGTTTTTATTTTTTATGCATTCCATTTTTATTCTAATGTATTTGTTTCCTTTTTATGTAAAGCACTTTGAATTACCATTGTGTATGAAATGTGCTAAATAAAATTGCCTTGCCTAATCGACTCTCCGACAGTAGGTGGCGCTGGAACAGAAGAAATAAAGCCGTTTCCCTGGTAACCTCTGTACACAAAGCAGCTCTGCTTATAACAACGCATTCAAATAGCTCGAATACCTCTTATAAAAATGAACCATGGTTTCACTACAAATAAAACAAAATGGTTATTGTAGTTGACCATGGTAACCACAAATTAACCATGGTTTTGCTACACTATAGTTTATGGTATTTGTAGTAAAATTATTGTTATATAAATAGTAGCCTATCAATCCGAGAAAAAAAAAAAAATCATAGTTACACACTTTTAACCATGGTTAATTTTCGTATGTGTTCACAATAGTTTGCAATGCAAGCTATTTGCAATATGTTATTTTGCTAACTTTTTATACATGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_03528076_03531738.mRNA True 1438 mRNA 0.37 2 3527843 3532610

Neighbor

gene id symbol gene type direction distance location
CI01000050_03448766_03465009 LGI3 coding upstream 61976 3448766 ~ 3465867 (+)
CI01000050_03392003_03421994 FGFR1A, FGFR1 coding upstream 104930 3392003 ~ 3422913 (+)
CI01000050_03306831_03324064 NA coding upstream 203599 3306831 ~ 3324244 (+)
CI01000050_03272821_03284544 KCTD9, KCTD9A coding upstream 243081 3272219 ~ 3284762 (+)
CI01000050_03238081_03239214 NPY8BR coding upstream 288529 3237717 ~ 3239314 (+)
CI01000050_03552033_03552887 NA coding downstream 18512 3551122 ~ 3552923 (+)
CI01000050_03557372_03567755 CHMP7 coding downstream 24717 3557327 ~ 3567979 (+)
CI01000050_03573096_03586434 ENTPD4 coding downstream 40486 3573096 ~ 3587311 (+)
CI01000050_03599274_03618237 SLC25A37 coding downstream 66664 3599274 ~ 3619040 (+)
CI01000050_03641769_03645039 NA coding downstream 106577 3639187 ~ 3645109 (+)
G213019 NA non-coding upstream 315989 3211584 ~ 3211854 (+)
G213016 NA non-coding upstream 326201 3199786 ~ 3201642 (+)
G213000 NA non-coding upstream 337104 3190519 ~ 3190739 (+)
G212988 NA non-coding upstream 352844 3174704 ~ 3174999 (+)
G212986 NA non-coding upstream 354889 3172624 ~ 3172954 (+)
G213113 NA non-coding downstream 17588 3550198 ~ 3550580 (+)
G213153 NA non-coding downstream 139282 3671892 ~ 3672877 (+)
G214496 NA non-coding downstream 195923 3728533 ~ 3728810 (+)
G214500 NA non-coding downstream 199358 3731968 ~ 3732173 (+)
G214501 NA non-coding downstream 205581 3738191 ~ 3738542 (+)
CI01000050_02852118_02864754 RNF122 other upstream 662021 2852118 ~ 2865822 (+)
G212927 NA other upstream 752710 2774839 ~ 2775133 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 1830435 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 2228237 1296365 ~ 1298255 (+)
G212184 NA other upstream 3093637 433684 ~ 434206 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 272533 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 417992 3931890 ~ 3957044 (+)
G214717 NA other downstream 574972 4107582 ~ 4108280 (+)
CI01000050_04591548_04592778 NA other downstream 1058945 4589926 ~ 4593049 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 1874975 5407585 ~ 5409417 (+)

Expression


Co-expression Network