CI01000050_03306831_03324064


Basic Information

Item Value
gene id CI01000050_03306831_03324064
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 3306831 ~ 3324244 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_03306831_03324064.mRNA
TTCCGATGTGACGTTGAACATGACCGACTGAAAGTGGTAGCCCTGGCTGAGCCCACGCCGTTCACTCTTTATCCAGGGGAAAAACTGGAGCTGAGCTGTAAAGGTAAAGAGGAGACACAGGAAGTGACCTGGACTAAGGACCATGTGCCACTGGTTGACGGAGAGCACACCCGTCTGCGCGACCATCAGATGGAGATTGAAACAGTAGAGCCAGCCGACTCTGGTCTGTATGCTTGCTTTGCTCAGGGACCCAACAGCAACCATACAGATTACTTCAATGTCAACGTCACTGATGGATTGATTTCCTCAGAAGATGATGATGAAGATGAGTCTTCCTCAGAGGAGGCCAAGCTATCAAGTGACCAGAAGCTGCTTCCAATGGCGCCTGTCTGGGCTCATCCTGATAAGATGGAGAAGAAGCTCCACGCGGTTCCCGCCAGCAAAACTGTCAAGTTCCGTTGCCAGGCCAACGGTAACCCTACACCAACACTCAAGTGGCTCAAGAACGGCAAAGAGTTTAAGAAAGATCAGCGAATAGGAGGATTCAAGGTTCGAGAACACATGTGGACCATCATAATGGAGTCGGTGGTACCGGCAGACAAAGGAAACTACACCTGCCTGGTGGAAAACAAATATGGCAGCATCAATCACACCTACCAGCTGGATGTAGTCGTAGTGGTGGGTAGTGACGTGGAGTTTGAGTGTAAAGTCTTCAGCGATTCTCAGCCACACATCCAGTGGCTGAAACACATCGAGGTGGATGGCAGCAGAGTTGGCCCTGACGGACTGCCGTATGTTCGGATCTTGAAGACGGAAGGCGTCAATACTACGGTTAAGGAGATGGAGGTACTGCAGATCAGGAATGTGTCTTTAGAGGATGCTGGAGAGTACACCTGCTTGGCTGGGAACTCTGTCGGTCACTCCCATCACTCTGCATGGTTGACTGTCTATAAAGAAGTGCCGGCATCATGCTCCAGTTCAGCCTGGGCGGTCCTATACCTGTCTTCTGCACTGCCACCTGCCCTGGACTGTGTGTTTTTCCCCCTTATGAAATTTGCAGACAGTTTTCACTGGTGTGAAGAACATGGAGGAGCAGAGCTGTTTATGATTGATGACATGCTGGCTGGCAACTGCATTCGCAGACTTGACCCAGATGCAATGGCACCCTACTGTACTCATCCTGAGAAGATGAAGAAGCTATACACGGTTCAAACCAGTTATAACGTAATGTTCTATTGCCAGGCCAAAGGTAACCCTTACACCAACACTCAAGTGGCTCAAGAACAGCAAAGAGTTTACACGAAAAGGAGCCTTCGGGGCGTCAACACTACGGTTAAGGAGATGGAGATACTGCAGATCAGGAATGTGTCTTTAGATGATGCTAGAGAGTACACCTGCTTGACTGGGAACTCTATCGACGTCTACCGCCAGTCTGCATGGTTGACTGTCTATGAAGGTATCTTCGGTCCTTGCGTTGCTCTCTTTGGTTGACTGCGACAGTTCACACTGTGGTTTGAACACTTTGTATCACTGTAAAAAAAATCTTATTAAATTTATGGTAAAAAATTGGCAGCTGTTGTTGCCAGTGTAAAAAATGTGGTAGCCACATTTTAGGTTTTACCGATTTAACTTAAATTGACAGTAAAAAAAAAAAAAAAAAAATGTATTTCA

Function

NR:

description
Fgfr1 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_03306831_03324064.mRNA True 1671 mRNA 0.48 11 3306831 3324244

Neighbor

gene id symbol gene type direction distance location
CI01000050_03272821_03284544 KCTD9, KCTD9A coding upstream 22069 3272219 ~ 3284762 (+)
CI01000050_03238081_03239214 NPY8BR coding upstream 67517 3237717 ~ 3239314 (+)
CI01000050_03224108_03230670 NA coding upstream 75670 3224057 ~ 3231161 (+)
CI01000050_03129712_03134758 TBX16 coding upstream 171868 3129712 ~ 3134963 (+)
CI01000050_02995539_03115563 CABIN1 coding upstream 190753 2995539 ~ 3116078 (+)
CI01000050_03392003_03421994 FGFR1A, FGFR1 coding downstream 67759 3392003 ~ 3422913 (+)
CI01000050_03448766_03465009 LGI3 coding downstream 124522 3448766 ~ 3465867 (+)
CI01000050_03528076_03531738 NA coding downstream 203599 3527843 ~ 3532610 (+)
CI01000050_03552033_03552887 NA coding downstream 226878 3551122 ~ 3552923 (+)
CI01000050_03557372_03567755 CHMP7 coding downstream 233083 3557327 ~ 3567979 (+)
G213019 NA non-coding upstream 94977 3211584 ~ 3211854 (+)
G213016 NA non-coding upstream 105189 3199786 ~ 3201642 (+)
G213000 NA non-coding upstream 116092 3190519 ~ 3190739 (+)
G212988 NA non-coding upstream 131832 3174704 ~ 3174999 (+)
G212986 NA non-coding upstream 133877 3172624 ~ 3172954 (+)
G213074 NA non-coding downstream 122220 3446464 ~ 3545111 (+)
G213113 NA non-coding downstream 225954 3550198 ~ 3550580 (+)
G213153 NA non-coding downstream 347648 3671892 ~ 3672877 (+)
G214496 NA non-coding downstream 404289 3728533 ~ 3728810 (+)
G214500 NA non-coding downstream 407724 3731968 ~ 3732173 (+)
CI01000050_02852118_02864754 RNF122 other upstream 441009 2852118 ~ 2865822 (+)
G212927 NA other upstream 531698 2774839 ~ 2775133 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 1609423 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 2007225 1296365 ~ 1298255 (+)
G212184 NA other upstream 2872625 433684 ~ 434206 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 480899 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 626358 3931890 ~ 3957044 (+)
G214717 NA other downstream 783338 4107582 ~ 4108280 (+)
CI01000050_04591548_04592778 NA other downstream 1267311 4589926 ~ 4593049 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 2083341 5407585 ~ 5409417 (+)

Expression


Co-expression Network