CI01000050_01691894_01697791 (SULT1ST2, SULT1ST3)


Basic Information

Item Value
gene id CI01000050_01691894_01697791
gene name SULT1ST2, SULT1ST3
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 1691374 ~ 1698973 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_01691894_01697791.mRNA
GTATAAGGGCAGGACATTGACCCACCAGGAGCAGGATTAGACATCCCTGTCATAAGAACACAGTGTTACCACAGCATTCAAGATGTTCCCTCAGGAAAGACAAAGTGTACACTGACAAACCAATCCAGTTTTATCACACAGATAAATCAACAGCAAGTTATAGTAACATAATAGCTCCTAACACAGTTAAAAAATAATCAACAAAATGACCAAACAGGGTTTGAGGCAATGTTGAGATCTCTTCTGGAATGCTAAAGAAGACACATGTGATATTACTAGAGTTACAGGAACATTTCTTTCCTGTGGGGAGGGCAGTTTGAACATGTGTAATGTTGTTTTACGGCTGAGTGAAAAGCACAGAGAAAAGGGTGGGGCTAAGCTGTGAACAGAATATTAGAGACAGCACTGAATAGCAATAATCAGAAGTCCTGTTTGCATTTTGAGGAACACAAGCGAGCTGCCAGAAACATTATAGGACAGTGGAAGAGAATACAGAAAATTGAAACACTTTTTCACCATAATGGAAATCCCTGACATGCCTTCACTGAAACTACATAGTCGGCCAGAGATGTTTGATTTTGAGGGTATTTCTATGACTCGCTTTTTCACTGACAACTGGGAAAAGGTGAAAAACTTTCAAGCGAGATCTGATGACATTCTTATCGCCACTTATCCCAAAGCAGGTACCACATGGGTTTCTTATATTCTGGACCTTCTGTATTTTGGTAAGGATGATCTAGAGCGTCAGACTTCCCAGCCAATCTATGAGAGAGTCCCATGCCTGGAAGCATGCTTTTCAACAGGGACAGAAATGGCTGATCATCTGCCCACCTCTCCTCGTCTCATCAAAACTCATTTACCTGTTCATCTGGTACCCAAGTCCTTCTGGGAGCAGAACTCAAGGATTGTGTATGTAGCACGTAATGCAAAAGACAATGCTGTTTCCTATTTTCATTTTGATCGAATGAACATGGTACAGCCTGAACCAGGAGAATGGAACAACTTCTTAGAGAAATATATGAAAGGGAAAAATGTGTTCGGTCCTTGGTACGATCATGTCAATGGATGGTGGGAGAAAAAACAGACGTATTCTAACCTACTGTACTTGTTCTATGAGGATTTGGTTGAAGACACTGGACGTGAGGTGGAACATTTGTGCTCCTTCTTGGGTTTGTCCACCTCAGTTAAAGAAAGGGAGAAAATAACAAAAGGGGTTCAGTTTGATGCCATGAAACAGAACAACATGATCAACCATGTCACAATCCCTTTCATGGACTTCGAGATCTCACCCTTCATGCGGAAAGGTAAAGTTGGAGACTGGAAACGTCACTTCACAGTGGCACAAAATGAAGAGTTTGATGAGGTCTACAAACAGAAGATGAAGAAAACCACTGTCGAGTTCCGCACTGAGATTTAATATTCCAGTTCTAGAGTTCTAGGAAGAAGGTTGATTGTTGCTGTTCTGTTTTCACATAGAGGATATTTAAGATGTTTTTGCACACAAACTAGTGCTGCACAATTTATCGCACAACACGAAAAATAACATTGAATAACATTGAAACGCGATTATCGCTTAAACGCGATTCTTAGTACGATTATGAAATCGCAAAGGCTGTGATGTATTTATTTTTATTTTTGTATATATTCTGATGTGTGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATAATTAATTTTTTTTTTTTTTTTTTAAATGCGCGGCTTGTCAATGAAATATGGCTCCAAATGCTAATCCATCTGAAAGCACTGCGAGTTTGAGTCGCTTATAAATGTACATTTGAAAAAGCAACATGCGTCAAACATCTTTCCAGACTTAAGAAGCATTTATTATGTATCATTATAGATTATTATAACTATATTACATCTTGTCAACAAAAGACAACATTTAATAACATGTTTTTACTCCAAACTCACTTCATAACGACAGTTGAGCATCCTCCTGTAAGATGATGTGGATCTTACACAGAATAAGGCAGTCATGTGTTTATTAGTCATGTTTAATCAAAGCGTTTCAATCCTCTGTTTATTCAGCTACAGCGATATGATGCATGTTATCTACTTCTATGGCAGGGCATATTCAGAGTTTCTGCACAAGAGCGCCCTCTGGCTTTCAGATGGAGAAGCATTTGCTACTGATCACAGAGCTGTACAGCTCTGACAAGCTGCGCATTAAATAATCGCAGCCTTTGCCAAACCTTGTGCGATTTAATCGTGATAAATTGTGCAGCCCTAAAAACACTGTAAAAACCTAAGCTATGATGTACTCAATTTTGTACATGTACAATTTAAGGCTGTGAAATCAATGAAATCTACCTTATGAACTGA
>TU240958
TGTTTGCATTTTGAGGAACACAAGCGAGCTGCCAGAAACATTATAGGACAGTGGAAGAGAATACAGAAAATTGAAACACTTTTTCACCATAATGGAAATCCCTGACATGCCTTCACTGAAACTACATAGTCGGCCAGAGATGTTTGATTTTGAGGGTATTTCTATGACTCGCTTTTTCACTGACAACTGGGAAAAGGTGAAAAACTTTCAAGCGAGATCTGATGACATTCTTATCGCCACTTATCCCAAAGCAGGTACCACATGGGTTTCTTATATTCTGGACCTTCTGTATTTTGGTAAGGATGATCTAGAGCGTCAGACTTCCCAGCCAATCTATGAGAGAGTCCCATGCCTGGAAGCATGCTTTTCAACAGTTACAGGGACAGAAATGGCTGATCATCTGCCCACCTCTCCTCGTCTCATCAAAACTCATTTACCTGTTCATCTGGTACCCAAGTCCTTCTGGGAGCAGAACTCAAGGATTGTGTATGTAGCACGTAATGCAAAAGACAATGCTGTTTCCTATTTTCATTTTGATCGAATGAACATGGTACAGCCTGAACCAGGAGAATGGAACAACTTCTTAGAGAAATATATGAAAGGGAAAAATGTGTTCGGTCCTTGGTACGATCATGTCAATGGATGGTGGGAGAAAAAACAGACGTATTCTAACCTACTGTACTTGTTCTATGAGGATTTGGTTGAAGACACTGGACGTGAGGTGGAACATTTGTGCTCCTTCTTGGGTTTGTCCACCTCAGTTAAAGAAAGGGAGA
>TU240968
ATGAAATATGGCTCCAAATGCTAATCCATCTGAAAGCACTGCGAGTTTGAGTCGCTTATAAATGTACATTTGAAAAAGCAACATGCGTCAAACATCTTTCCAGACTTAAGAAGCATTTATTATGTATCATTATAGATTATTATAACTATATTACATCTTGTCAACAAAAGACAACATTTAATAACATGTTTTTACTCCAAACTCACTTCATAACGACAGTTGAGCATCCTCCTGTAAGATGATGTGGATCTTACACAGAATAAGGCAGTCATGTGTTTATTAGTCATGTTTAATCAAAGCGTTTCAATCCTCTGTTTATTCAGCTACAGCGATATGATGCATGTTATCTACTTCTATGGCAGGGCATATTCAGAGTTTCTGCACAAGAGCGCCCTCTGGCTTTCAGATGGAGAAGCATTTGCTACTGATCACAGAGCTGTACAGCTCTGACAAGCTGCGCATTAAATAATCGCAGCCTTTGCCAAACCTTGTGCGATTTAATCGTGATAAATTGTGCAGCCCTAAAAACACTGTAAAAACCTAAGCTATGATGTACTCAATTTTGTACATGTACAATTTAAGGCTGTGAAATCAATGAAATCTACCTTATGAACTGAATAAATGTAAGTAAAAAGTTTTTAGTAGATCTAAATAACTACATTTGAAACTGAGTAGGCCCAATGAGTTATGGTTAATCAAAAGCCAAATTAAAAAAAATATTTATGAGTAATGTGATCTTTGTTATTTCATTGAATTTACTGCTACACTTTAATGTTAATTATATTATCAGAAAACTTAACACATTTAGCGTTGTCAGGCTTTTATGTGTGCTTAATGAATAAAACAGGAGCTGCG

Function

symbol description
sult1st2 Enables estrone sulfotransferase activity. Acts upstream of or within estrogen metabolic process and xenobiotic metabolic process. Predicted to be active in cytoplasm. Is expressed in intestinal bulb. Human ortholog(s) of this gene implicated in several diseases, including breast cancer; gastrointestinal system cancer (multiple); lung cancer (multiple); reproductive organ cancer (multiple); and urinary bladder cancer. Orthologous to several human genes including SULT1A1 (sulfotransferase family 1A member 1); SULT1A2 (sulfotransferase family 1A member 2); and SULT1A4 (sulfotransferase family 1A member 4).
sult1st3 Enables sulfotransferase activity. Involved in xenobiotic metabolic process. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in several diseases, including breast cancer; gastrointestinal system cancer (multiple); lung cancer (multiple); reproductive organ cancer (multiple); and urinary bladder cancer. Orthologous to human SULT1A1 (sulfotransferase family 1A member 1).

NR:

description
SULT1 sulfotransferase isoform 2

GO:

id name namespace
GO:0016232 HNK-1 sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_01691894_01697791.mRNA False 2361 mRNA 0.39 8 1691374 1698735
TU240958 False 776 TUCP 0.42 7 1691803 1697408
TU240968 True 855 lncRNA 0.34 1 1698119 1698973

Neighbor

gene id symbol gene type direction distance location
CI01000050_01674592_01678560 SULT1ST1, SULT1ST2, SULT1ST3 coding upstream 12814 1674592 ~ 1678560 (+)
CI01000050_01662474_01662718 NA coding upstream 28638 1662474 ~ 1662736 (+)
CI01000050_01644444_01659372 GABRD, GBRD coding upstream 31962 1644444 ~ 1659412 (+)
CI01000050_01552520_01553273 NA coding upstream 137728 1552354 ~ 1553646 (+)
CI01000050_01374628_01443035 NA coding upstream 248194 1374279 ~ 1443180 (+)
CI01000050_01701779_01712905 RBSN coding downstream 2879 1701614 ~ 1713078 (+)
CI01000050_01803081_01804190 B3GALT4 coding downstream 101873 1800608 ~ 1806958 (+)
CI01000050_01877310_01902523 ADGRD2 coding downstream 178575 1877310 ~ 1902773 (+)
CI01000050_02211327_02213220 NA coding downstream 512059 2210794 ~ 2213489 (+)
CI01000050_02268620_02283626 NADK, NADKA coding downstream 569885 2268620 ~ 2285331 (+)
G212554 NA non-coding upstream 25347 1665750 ~ 1666027 (+)
G212550 NA non-coding upstream 53827 1637319 ~ 1637547 (+)
G212543 NA non-coding upstream 66141 1620819 ~ 1625233 (+)
G212527 NA non-coding upstream 130020 1561128 ~ 1561354 (+)
G212522 NA non-coding upstream 142997 1547021 ~ 1548377 (+)
G212560 NA non-coding downstream 24136 1722871 ~ 1723075 (+)
G212450 NA non-coding downstream 34269 1733004 ~ 1746070 (+)
G212444 NA non-coding downstream 35324 1734059 ~ 1748023 (+)
G212564 NA non-coding downstream 51289 1750024 ~ 1753308 (+)
G212592 NA non-coding downstream 155978 1854713 ~ 1854923 (+)
CI01000050_01296683_01297763 SELENOK other upstream 391768 1296365 ~ 1298255 (+)
G212184 NA other upstream 1257168 433684 ~ 434206 (+)
G212006 NA other upstream 1553363 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 1664962 12079 ~ 26412 (+)
G212927 NA other downstream 1076104 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 1144084 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 2106408 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 2251867 3931890 ~ 3957044 (+)
G214717 NA other downstream 2408847 4107582 ~ 4108280 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 711 1691374 ~ 1698973 (+)

Expression


Co-expression Network