CI01000050_01662474_01662718


Basic Information

Item Value
gene id CI01000050_01662474_01662718
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 1662474 ~ 1662736 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_01662474_01662718.mRNA
TATCCTGATATGTACAACTACCTCATCAACTTTCCCTCGTCCTACTCCGGAGACTCTTTAAAAGCCTACAAAAGTCTGGAGGGGTACAAATGGACACAATCTAATTTTGTGATGAATATTGAACTTTGGAGTCTGCCGGCTAAAACCTGCTTCGTCATCATTGGAAGGGTAGCCAGCATAGCTATATAGTATACATTAGACATCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_01662474_01662718.mRNA True 207 mRNA 0.41 2 1662474 1662736

Neighbor

gene id symbol gene type direction distance location
CI01000050_01644444_01659372 GABRD, GBRD coding upstream 3062 1644444 ~ 1659412 (+)
CI01000050_01552520_01553273 NA coding upstream 108828 1552354 ~ 1553646 (+)
CI01000050_01374628_01443035 NA coding upstream 219294 1374279 ~ 1443180 (+)
CI01000050_01346318_01366815 CHDH coding upstream 294817 1346195 ~ 1367657 (+)
CI01000050_01301443_01316664 ACTR8 coding upstream 345303 1301443 ~ 1317171 (+)
CI01000050_01674592_01678560 SULT1ST1, SULT1ST2, SULT1ST3 coding downstream 11856 1674592 ~ 1678560 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 coding downstream 28638 1691374 ~ 1698973 (+)
CI01000050_01701779_01712905 RBSN coding downstream 38878 1701614 ~ 1713078 (+)
CI01000050_01803081_01804190 B3GALT4 coding downstream 137872 1800608 ~ 1806958 (+)
CI01000050_01877310_01902523 ADGRD2 coding downstream 214574 1877310 ~ 1902773 (+)
G212550 NA non-coding upstream 24927 1637319 ~ 1637547 (+)
G212543 NA non-coding upstream 37241 1620819 ~ 1625233 (+)
G212527 NA non-coding upstream 101120 1561128 ~ 1561354 (+)
G212522 NA non-coding upstream 114097 1547021 ~ 1548377 (+)
G212508 NA non-coding upstream 152313 1509933 ~ 1510161 (+)
G212554 NA non-coding downstream 3014 1665750 ~ 1666027 (+)
G212560 NA non-coding downstream 60135 1722871 ~ 1723075 (+)
G212450 NA non-coding downstream 70268 1733004 ~ 1746070 (+)
G212444 NA non-coding downstream 71323 1734059 ~ 1748023 (+)
CI01000050_01296683_01297763 SELENOK other upstream 362868 1296365 ~ 1298255 (+)
G212184 NA other upstream 1228268 433684 ~ 434206 (+)
G212006 NA other upstream 1524463 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 1636062 12079 ~ 26412 (+)
G212927 NA other downstream 1112103 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 1180083 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 2142407 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 2287866 3931890 ~ 3957044 (+)

Expression


Co-expression Network