Gene
RNA
| Item | Value |
|---|---|
| gene id | G212522 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000050 |
| NCBI id | null |
| chromosome length | 7556436 |
| location | 1547021 ~ 1548377 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU241062 | True | 1181 | lncRNA | 0.39 | 2 | 1547021 | 1548377 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000050_01374628_01443035 | NA | coding | upstream | 103841 | 1374279 ~ 1443180 (+) |
| CI01000050_01346318_01366815 | CHDH | coding | upstream | 179364 | 1346195 ~ 1367657 (+) |
| CI01000050_01301443_01316664 | ACTR8 | coding | upstream | 229850 | 1301443 ~ 1317171 (+) |
| CI01000050_01296683_01297763 | SELENOK | coding | upstream | 248766 | 1296365 ~ 1298255 (+) |
| CI01000050_01284083_01292321 | NA | coding | upstream | 253301 | 1284019 ~ 1293720 (+) |
| CI01000050_01552520_01553273 | NA | coding | downstream | 3977 | 1552354 ~ 1553646 (+) |
| CI01000050_01644444_01659372 | GABRD, GBRD | coding | downstream | 96067 | 1644444 ~ 1659412 (+) |
| CI01000050_01662474_01662718 | NA | coding | downstream | 114097 | 1662474 ~ 1662736 (+) |
| CI01000050_01674592_01678560 | SULT1ST1, SULT1ST2, SULT1ST3 | coding | downstream | 126215 | 1674592 ~ 1678560 (+) |
| CI01000050_01691894_01697791 | SULT1ST2, SULT1ST3 | coding | downstream | 142997 | 1691374 ~ 1698973 (+) |
| G212508 | NA | non-coding | upstream | 36860 | 1509933 ~ 1510161 (+) |
| G212473 | NA | non-coding | upstream | 183092 | 1358603 ~ 1363929 (+) |
| G212466 | NA | non-coding | upstream | 210705 | 1332367 ~ 1336316 (+) |
| G212357 | NA | non-coding | upstream | 313287 | 1233092 ~ 1233734 (+) |
| G212376 | NA | non-coding | upstream | 345220 | 1196025 ~ 1201801 (+) |
| G212527 | NA | non-coding | downstream | 12751 | 1561128 ~ 1561354 (+) |
| G212543 | NA | non-coding | downstream | 72442 | 1620819 ~ 1625233 (+) |
| G212550 | NA | non-coding | downstream | 88942 | 1637319 ~ 1637547 (+) |
| G212554 | NA | non-coding | downstream | 117373 | 1665750 ~ 1666027 (+) |
| G212184 | NA | other | upstream | 1112815 | 433684 ~ 434206 (+) |
| G212006 | NA | other | upstream | 1409010 | 82604 ~ 138011 (+) |
| CI01000050_00012155_00026251 | NA | other | upstream | 1520609 | 12079 ~ 26412 (+) |
| G212927 | NA | other | downstream | 1226462 | 2774839 ~ 2775133 (+) |
| CI01000050_02852118_02864754 | RNF122 | other | downstream | 1294442 | 2852118 ~ 2865822 (+) |
| CI01000050_03807697_03808793 | CLCN5B, CLCN5 | other | downstream | 2256766 | 3805143 ~ 3808870 (+) |
| CI01000050_03938328_03956122 | RHOBTB2 | other | downstream | 2402225 | 3931890 ~ 3957044 (+) |
