Gene
RNA
| Item | Value |
|---|---|
| gene id | G212357 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000050 |
| NCBI id | null |
| chromosome length | 7556436 |
| location | 1233092 ~ 1233734 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU240884 | False | 567 | lncRNA | 0.38 | 2 | 1233092 | 1233734 |
| TU240885 | True | 526 | lncRNA | 0.39 | 2 | 1233092 | 1233693 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000050_01048195_01109752 | NA | coding | upstream | 123340 | 1047970 ~ 1109752 (+) |
| CI01000050_01039500_01042679 | TLR9 | coding | upstream | 190293 | 1039500 ~ 1042799 (+) |
| CI01000050_01023375_01033682 | APEH | coding | upstream | 198923 | 1023375 ~ 1034169 (+) |
| CI01000050_01002924_01005496 | NA | coding | upstream | 227578 | 1002924 ~ 1005514 (+) |
| CI01000050_00967544_00997883 | BSN, BSNA | coding | upstream | 235209 | 967544 ~ 997883 (+) |
| CI01000050_01261502_01265283 | PARAPINOPSINA | coding | downstream | 27633 | 1261367 ~ 1265283 (+) |
| CI01000050_01284083_01292321 | NA | coding | downstream | 50285 | 1284019 ~ 1293720 (+) |
| CI01000050_01296683_01297763 | SELENOK | coding | downstream | 62631 | 1296365 ~ 1298255 (+) |
| CI01000050_01301443_01316664 | ACTR8 | coding | downstream | 67709 | 1301443 ~ 1317171 (+) |
| CI01000050_01346318_01366815 | CHDH | coding | downstream | 112461 | 1346195 ~ 1367657 (+) |
| G212376 | NA | non-coding | upstream | 31291 | 1196025 ~ 1201801 (+) |
| G212366 | NA | non-coding | upstream | 57049 | 1172134 ~ 1176043 (+) |
| G212296 | NA | non-coding | upstream | 323063 | 909813 ~ 910029 (+) |
| G212294 | NA | non-coding | upstream | 405007 | 827818 ~ 828085 (+) |
| G212293 | NA | non-coding | upstream | 405964 | 826804 ~ 827128 (+) |
| G212466 | NA | non-coding | downstream | 98633 | 1332367 ~ 1336316 (+) |
| G212473 | NA | non-coding | downstream | 124869 | 1358603 ~ 1363929 (+) |
| G212508 | NA | non-coding | downstream | 276199 | 1509933 ~ 1510161 (+) |
| G212522 | NA | non-coding | downstream | 313287 | 1547021 ~ 1548377 (+) |
| G212527 | NA | non-coding | downstream | 327394 | 1561128 ~ 1561354 (+) |
| G212184 | NA | other | upstream | 798886 | 433684 ~ 434206 (+) |
| G212006 | NA | other | upstream | 1095081 | 82604 ~ 138011 (+) |
| CI01000050_00012155_00026251 | NA | other | upstream | 1206680 | 12079 ~ 26412 (+) |
| CI01000050_01691894_01697791 | SULT1ST2, SULT1ST3 | other | downstream | 458069 | 1691374 ~ 1698973 (+) |
| G212927 | NA | other | downstream | 1541105 | 2774839 ~ 2775133 (+) |
| CI01000050_02852118_02864754 | RNF122 | other | downstream | 1609085 | 2852118 ~ 2865822 (+) |
| CI01000050_03807697_03808793 | CLCN5B, CLCN5 | other | downstream | 2571409 | 3805143 ~ 3808870 (+) |
