CI01000050_01002924_01005496


Basic Information

Item Value
gene id CI01000050_01002924_01005496
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 1002924 ~ 1005514 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_01002924_01005496.mRNA
GACTGGAATCACAGGACTCTACCAACTCAAGGTCTGGGTCATAATTCAAAGGAGACAACACTATTTGCTCTGCAAGCCAAATTAAGCATTTTAGGTGGAGCAGCCTGCATCTGTCAGGACAGGCGTCCAATGCGTAGAGAGACCATAATAATTCACACTGCAGTCAATGGGTTGGGAGGGAGACTCTGCTGCTGCACATACTCTATGTTCAAGCACTGTCTGAGCAGCTGGTCCAAAAATCTGTCCAGAAGGAGATCAGATTCCACACTCAACACGTTCCTGTACTTTGCCTTTAAGGCCACAAGCACCGAAAATCCCACCTCACACATATACGTCATTGTGGCAAACGGCATCAAAAACATCATTGCCTTGTCTGCGAGTTCAGGGTATTCGCTTGACACATGTAACCAGAACTGAGTCAAAGTTTTTTTCAGA

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_01002924_01005496.mRNA True 435 mRNA 0.46 3 1002924 1005514

Neighbor

gene id symbol gene type direction distance location
CI01000050_00967544_00997883 BSN, BSNA coding upstream 5041 967544 ~ 997883 (+)
CI01000050_00931338_00939002 DCAF1 coding upstream 63922 931338 ~ 939002 (+)
CI01000050_00916485_00921744 DCAF1 coding upstream 81180 916485 ~ 921744 (+)
CI01000050_00851621_00899726 MIB2 coding upstream 101760 851526 ~ 901164 (+)
CI01000050_00818849_00822703 UBIAD1 coding upstream 179785 818849 ~ 823139 (+)
CI01000050_01023375_01033682 APEH coding downstream 17861 1023375 ~ 1034169 (+)
CI01000050_01039500_01042679 TLR9 coding downstream 33986 1039500 ~ 1042799 (+)
CI01000050_01048195_01109752 NA coding downstream 42456 1047970 ~ 1109752 (+)
CI01000050_01261502_01265283 PARAPINOPSINA coding downstream 255853 1261367 ~ 1265283 (+)
CI01000050_01284083_01292321 NA coding downstream 278505 1284019 ~ 1293720 (+)
G212296 NA non-coding upstream 92895 909813 ~ 910029 (+)
G212294 NA non-coding upstream 174839 827818 ~ 828085 (+)
G212293 NA non-coding upstream 175796 826804 ~ 827128 (+)
G212104 NA non-coding upstream 238489 763998 ~ 764435 (+)
G212269 NA non-coding upstream 256346 745947 ~ 746578 (+)
G212366 NA non-coding downstream 166620 1172134 ~ 1176043 (+)
G212376 NA non-coding downstream 190511 1196025 ~ 1201801 (+)
G212357 NA non-coding downstream 227578 1233092 ~ 1233734 (+)
G212466 NA non-coding downstream 326853 1332367 ~ 1336316 (+)
G212473 NA non-coding downstream 353089 1358603 ~ 1363929 (+)
G212184 NA other upstream 568718 433684 ~ 434206 (+)
G212006 NA other upstream 864913 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 976512 12079 ~ 26412 (+)
CI01000050_01296683_01297763 SELENOK other downstream 291132 1296365 ~ 1298255 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other downstream 686289 1691374 ~ 1698973 (+)
G212927 NA other downstream 1769325 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 1837305 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 2799629 3805143 ~ 3808870 (+)

Expression


Co-expression Network