G212473


Basic Information

Item Value
gene id G212473
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 1358603 ~ 1363929 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU241007
GTAGCAAAGTTCAGTATTCAGGAAGGAAGAGGACAGGGTCGGCTTGACTACTGACTGCTTTTTATTTGCACTAATTCTCACAATACAAAACAAAAGGGGTGCAGACAGGCACAAAGCGGTCACAAATCATTCACAATTCTCTCACACGTAGATCACCAGCGGGGCAGCAGTCAGTAGTCCGTCTCTCTCTCACCCACTCCTGTTTCTCCTGGTGTTATATACTCTCTCCACACCAATTACTGAAACAAGAGACAGGTGTTCGTCATTTGCATTTAACCCACTCACTCACCGTTCGTCTCCTGACTCTCTCTCCCGCTGCCGACTCCGCTGAACCACGCCCCCCTCGCCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241007 True 351 lncRNA 0.50 2 1358603 1363929

Neighbor

gene id symbol gene type direction distance location
CI01000050_01301443_01316664 ACTR8 coding upstream 41432 1301443 ~ 1317171 (+)
CI01000050_01296683_01297763 SELENOK coding upstream 60348 1296365 ~ 1298255 (+)
CI01000050_01284083_01292321 NA coding upstream 64883 1284019 ~ 1293720 (+)
CI01000050_01261502_01265283 PARAPINOPSINA coding upstream 93320 1261367 ~ 1265283 (+)
CI01000050_01048195_01109752 NA coding upstream 248851 1047970 ~ 1109752 (+)
CI01000050_01374628_01443035 NA coding downstream 10350 1374279 ~ 1443180 (+)
CI01000050_01552520_01553273 NA coding downstream 188425 1552354 ~ 1553646 (+)
CI01000050_01644444_01659372 GABRD, GBRD coding downstream 280515 1644444 ~ 1659412 (+)
CI01000050_01662474_01662718 NA coding downstream 298545 1662474 ~ 1662736 (+)
CI01000050_01674592_01678560 SULT1ST1, SULT1ST2, SULT1ST3 coding downstream 310663 1674592 ~ 1678560 (+)
G212466 NA non-coding upstream 22287 1332367 ~ 1336316 (+)
G212357 NA non-coding upstream 124869 1233092 ~ 1233734 (+)
G212376 NA non-coding upstream 156802 1196025 ~ 1201801 (+)
G212366 NA non-coding upstream 182560 1172134 ~ 1176043 (+)
G212296 NA non-coding upstream 448574 909813 ~ 910029 (+)
G212508 NA non-coding downstream 146004 1509933 ~ 1510161 (+)
G212522 NA non-coding downstream 183092 1547021 ~ 1548377 (+)
G212527 NA non-coding downstream 197199 1561128 ~ 1561354 (+)
G212543 NA non-coding downstream 256890 1620819 ~ 1625233 (+)
G212550 NA non-coding downstream 273390 1637319 ~ 1637547 (+)
G212184 NA other upstream 924397 433684 ~ 434206 (+)
G212006 NA other upstream 1220592 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 1332191 12079 ~ 26412 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other downstream 327874 1691374 ~ 1698973 (+)
G212927 NA other downstream 1410910 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 1478890 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 2441214 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 2586673 3931890 ~ 3957044 (+)

Expression


Co-expression Network