G212543


Basic Information

Item Value
gene id G212543
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 1620819 ~ 1625233 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU241084
CTTTCCGAGAGCAATTTAGCCACAATCTCCATTTTCCCCACTCTCTGTGTATCTTCAAATTCCGCTTTTTTCTTGTTGATGCGCTCCTGCAGTCTCAGTCGGTGGATGTATTCAGTACTGTTCAATCCTTTGGCCTCCAGAGACTCTTTCATTTGTTGCTCTTGCTCTCTCTGTTTCTGTTCATAGGCTTTCTGTCGTTGTTTTCTAGCACACATAGTTTCCTGACTGGCAGCGAAACTGGCTTTAAGTGTCATCACTGCTGTCTGCCTCTTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241084 True 275 lncRNA 0.45 3 1620819 1625233

Neighbor

gene id symbol gene type direction distance location
CI01000050_01552520_01553273 NA coding upstream 67173 1552354 ~ 1553646 (+)
CI01000050_01374628_01443035 NA coding upstream 177639 1374279 ~ 1443180 (+)
CI01000050_01346318_01366815 CHDH coding upstream 253162 1346195 ~ 1367657 (+)
CI01000050_01301443_01316664 ACTR8 coding upstream 303648 1301443 ~ 1317171 (+)
CI01000050_01296683_01297763 SELENOK coding upstream 322564 1296365 ~ 1298255 (+)
CI01000050_01644444_01659372 GABRD, GBRD coding downstream 19211 1644444 ~ 1659412 (+)
CI01000050_01662474_01662718 NA coding downstream 37241 1662474 ~ 1662736 (+)
CI01000050_01674592_01678560 SULT1ST1, SULT1ST2, SULT1ST3 coding downstream 49359 1674592 ~ 1678560 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 coding downstream 66141 1691374 ~ 1698973 (+)
CI01000050_01701779_01712905 RBSN coding downstream 76381 1701614 ~ 1713078 (+)
G212527 NA non-coding upstream 59465 1561128 ~ 1561354 (+)
G212522 NA non-coding upstream 72442 1547021 ~ 1548377 (+)
G212508 NA non-coding upstream 110658 1509933 ~ 1510161 (+)
G212473 NA non-coding upstream 256890 1358603 ~ 1363929 (+)
G212466 NA non-coding upstream 284503 1332367 ~ 1336316 (+)
G212550 NA non-coding downstream 12086 1637319 ~ 1637547 (+)
G212554 NA non-coding downstream 40517 1665750 ~ 1666027 (+)
G212560 NA non-coding downstream 97638 1722871 ~ 1723075 (+)
G212450 NA non-coding downstream 107771 1733004 ~ 1746070 (+)
G212184 NA other upstream 1186613 433684 ~ 434206 (+)
G212006 NA other upstream 1482808 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 1594407 12079 ~ 26412 (+)
G212927 NA other downstream 1149606 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 1217586 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 2179910 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 2325369 3931890 ~ 3957044 (+)

Expression


Co-expression Network