CI01000050_01552520_01553273


Basic Information

Item Value
gene id CI01000050_01552520_01553273
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 1552354 ~ 1553646 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_01552520_01553273.mRNA
ATATATAATCAGTCCGGTGTTCGAGTGCTTCATCGAGGCTTTATTAGGGTGACAGATGATATTTAAATGCACAAACAGTGCGACTCCATGATGAAGTGAAGTGGGGGAGGTAGTTTGGCTTTATCCTCCATCTTCACTGTCCATTTCATCATCATCATCTGCACCAATGCAGGCTCAAAAAACACGGCTTTACATTCGTCCGCGAGGCCAGACATTACCGTTCAGCACCTTCATAACAGAAATGCGACTTTCTATTGTAGTGACCGACAGCAGAAATCACCTGACAGTATTTAACATGAATATGGAGCCCGATTATGAGTGCTGCTACGAACAGAGATCCACAGCTGCCCGACCTGCAGACAGTCCGTCAGTCAGTCAGCGGAGAGCGGCACTCCCCGAACCCGCAGCCGCGACAGCTGCAACCGCGCTGATTCTAGCCCAAATAACGCAAGCTTCACGCAAATGCCTTGTGGTAAATGTGGCCAACACAACGCTCGGTCCAAATTCAGCCTTTCTGTACGTCCCACACGCGTCGTTCTCCGGTGCTGGAGTGGTTCTTCTGCGTTCAGTATGTCAGGCTCTCGCTCCGGCCATCAGACAGCAGAGATGGGCGCGGTGACCCTGCTCTCAGGGCTGGGAAACCCCACGCTGCGCCTGCGTCACTACGCAACAGATTCGACTGTTTCGGCGCGAAATCACGTTTTAAGAATCGCCAGTTAATAGATTTGTTCTTGAAAGTGTTATAGATGGACAATGTTAAATATAAATAATCGTCTCAAGGATATGCAGGGTTGCCAACTTTTGAGTTCAGCTTGGAGTGAGAAATAAGGATTTTTTTTTTTTTTTTTTTTTTTTGAGCAGGGTGTTTTGATTCACTTCCGATTTCGATCCAGTATCGATTCGGATTATATCAGCTGAATCATGTTAATTTTTCATGTTAACTAATGCTGTGTAAACTATAGGGAACCCTGTCAGCTGGTAATATTAGGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_01552520_01553273.mRNA True 992 mRNA 0.46 2 1552354 1553646

Neighbor

gene id symbol gene type direction distance location
CI01000050_01374628_01443035 NA coding upstream 109174 1374279 ~ 1443180 (+)
CI01000050_01346318_01366815 CHDH coding upstream 184697 1346195 ~ 1367657 (+)
CI01000050_01301443_01316664 ACTR8 coding upstream 235183 1301443 ~ 1317171 (+)
CI01000050_01296683_01297763 SELENOK coding upstream 254099 1296365 ~ 1298255 (+)
CI01000050_01284083_01292321 NA coding upstream 258634 1284019 ~ 1293720 (+)
CI01000050_01644444_01659372 GABRD, GBRD coding downstream 90798 1644444 ~ 1659412 (+)
CI01000050_01662474_01662718 NA coding downstream 108828 1662474 ~ 1662736 (+)
CI01000050_01674592_01678560 SULT1ST1, SULT1ST2, SULT1ST3 coding downstream 120946 1674592 ~ 1678560 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 coding downstream 137728 1691374 ~ 1698973 (+)
CI01000050_01701779_01712905 RBSN coding downstream 147968 1701614 ~ 1713078 (+)
G212522 NA non-coding upstream 3977 1547021 ~ 1548377 (+)
G212508 NA non-coding upstream 42193 1509933 ~ 1510161 (+)
G212473 NA non-coding upstream 188425 1358603 ~ 1363929 (+)
G212466 NA non-coding upstream 216038 1332367 ~ 1336316 (+)
G212357 NA non-coding upstream 318620 1233092 ~ 1233734 (+)
G212527 NA non-coding downstream 7482 1561128 ~ 1561354 (+)
G212543 NA non-coding downstream 67173 1620819 ~ 1625233 (+)
G212550 NA non-coding downstream 83673 1637319 ~ 1637547 (+)
G212554 NA non-coding downstream 112104 1665750 ~ 1666027 (+)
G212184 NA other upstream 1118148 433684 ~ 434206 (+)
G212006 NA other upstream 1414343 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 1525942 12079 ~ 26412 (+)
G212927 NA other downstream 1221193 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 1289173 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 2251497 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 2396956 3931890 ~ 3957044 (+)

Expression


Co-expression Network