G212527


Basic Information

Item Value
gene id G212527
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 1561128 ~ 1561354 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU241067
CTCTGTTTGGCAAACAGGTACACTGTATAGTGGACGTCCATACGGGTTTTGCACAAAAGATTAACATGACGGCACATGCTAGTGGATGAGTTGAATCAACTCCACAGCAACTACATAAATTTATCCACTAACCATTCAGAAACGTCCAGTTTCATTCTAAAAGTTGTAACTTCTTCCTGAGTCTCTCCATCAGTGTCGACTCCGGTTTGAACAATGTAAGGCTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241067 True 227 lncRNA 0.42 1 1561128 1561354

Neighbor

gene id symbol gene type direction distance location
CI01000050_01552520_01553273 NA coding upstream 7482 1552354 ~ 1553646 (+)
CI01000050_01374628_01443035 NA coding upstream 117948 1374279 ~ 1443180 (+)
CI01000050_01346318_01366815 CHDH coding upstream 193471 1346195 ~ 1367657 (+)
CI01000050_01301443_01316664 ACTR8 coding upstream 243957 1301443 ~ 1317171 (+)
CI01000050_01296683_01297763 SELENOK coding upstream 262873 1296365 ~ 1298255 (+)
CI01000050_01644444_01659372 GABRD, GBRD coding downstream 83090 1644444 ~ 1659412 (+)
CI01000050_01662474_01662718 NA coding downstream 101120 1662474 ~ 1662736 (+)
CI01000050_01674592_01678560 SULT1ST1, SULT1ST2, SULT1ST3 coding downstream 113238 1674592 ~ 1678560 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 coding downstream 130020 1691374 ~ 1698973 (+)
CI01000050_01701779_01712905 RBSN coding downstream 140260 1701614 ~ 1713078 (+)
G212522 NA non-coding upstream 12751 1547021 ~ 1548377 (+)
G212508 NA non-coding upstream 50967 1509933 ~ 1510161 (+)
G212473 NA non-coding upstream 197199 1358603 ~ 1363929 (+)
G212466 NA non-coding upstream 224812 1332367 ~ 1336316 (+)
G212357 NA non-coding upstream 327394 1233092 ~ 1233734 (+)
G212543 NA non-coding downstream 59465 1620819 ~ 1625233 (+)
G212550 NA non-coding downstream 75965 1637319 ~ 1637547 (+)
G212554 NA non-coding downstream 104396 1665750 ~ 1666027 (+)
G212560 NA non-coding downstream 161517 1722871 ~ 1723075 (+)
G212184 NA other upstream 1126922 433684 ~ 434206 (+)
G212006 NA other upstream 1423117 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 1534716 12079 ~ 26412 (+)
G212927 NA other downstream 1213485 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 1281465 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 2243789 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 2389248 3931890 ~ 3957044 (+)

Expression


Co-expression Network