G212104


Basic Information

Item Value
gene id G212104
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 763998 ~ 764435 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU240614
GTGTCCCGCATTTTCACTCCATTGGCTGAGACTGATTTTAACACTTCTACATGTATGATCAGGAAATATTCCTGTGTCCCTCCCTCTCATAGCCTCTCTTTCATAGTAGATAGGTCCATCATTTTGAGTTAAATGTGTTCAAAAGTCACTACCAAACACCTTTTTTCTGCAATTTCTGTTATTCGATAAAATGTAGTTTTTATGTGTGTACAACTGTTCAGAGCTGTGTTAGCTAACCATGTGCTGATTAGCATCTAAAATTGTCACATCCGAAACTTCTCAACATGTTTTTTTAATTTATTTTTTTAATTCAATGCCACAAGAACAAGACTTCTCGACATGTTTCAGCCGTGACTGTTTTGGTAGTGACATCATTGTTTTGTTAGTGACAAAAGGGAACACATAATCATTTATTTGAGGAAAATAAACACAATTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240614 True 438 lncRNA 0.35 1 763998 764435

Neighbor

gene id symbol gene type direction distance location
CI01000050_00753574_00762446 S35E2, SLC35E2B coding upstream 1231 752374 ~ 762767 (+)
CI01000050_00718711_00742201 NA coding upstream 21797 718711 ~ 742201 (+)
CI01000050_00678001_00716978 NA coding upstream 47020 677899 ~ 716978 (+)
CI01000050_00648100_00653861 NA coding upstream 110125 648100 ~ 653873 (+)
CI01000050_00615170_00641706 NA coding upstream 122224 615170 ~ 641774 (+)
CI01000050_00770066_00782851 CDK11A, CDK11B coding downstream 5631 770066 ~ 782972 (+)
CI01000050_00818849_00822703 UBIAD1 coding downstream 54414 818849 ~ 823139 (+)
CI01000050_00851621_00899726 MIB2 coding downstream 87091 851526 ~ 901164 (+)
CI01000050_00916485_00921744 DCAF1 coding downstream 152050 916485 ~ 921744 (+)
CI01000050_00931338_00939002 DCAF1 coding downstream 166903 931338 ~ 939002 (+)
G212269 NA non-coding upstream 17420 745947 ~ 746578 (+)
G212261 NA non-coding upstream 99849 663684 ~ 664149 (+)
G212260 NA non-coding upstream 101550 661614 ~ 662448 (+)
G212113 NA non-coding upstream 104785 658564 ~ 659213 (+)
G212257 NA non-coding upstream 116711 647082 ~ 647287 (+)
G212293 NA non-coding downstream 62369 826804 ~ 827128 (+)
G212294 NA non-coding downstream 63383 827818 ~ 828085 (+)
G212296 NA non-coding downstream 145378 909813 ~ 910029 (+)
G212366 NA non-coding downstream 407699 1172134 ~ 1176043 (+)
G212376 NA non-coding downstream 431590 1196025 ~ 1201801 (+)
G212184 NA other upstream 329792 433684 ~ 434206 (+)
G212006 NA other upstream 625987 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 737586 12079 ~ 26412 (+)
CI01000050_01296683_01297763 SELENOK other downstream 532211 1296365 ~ 1298255 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other downstream 927368 1691374 ~ 1698973 (+)
G212927 NA other downstream 2010404 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 2078384 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 3040708 3805143 ~ 3808870 (+)

Expression


Co-expression Network