CI01000050_00648100_00653861


Basic Information

Item Value
gene id CI01000050_00648100_00653861
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 648100 ~ 653873 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_00648100_00653861.mRNA
ATGGGAGACTGGAGCAGTGTTCGCAACCGAACAGGTCAGTGCGCTCCGCCGCTGTCTCCGGTCATCGGGACTCTGAAGCTGGTGTCCGGCGACGGCACTAGCGTGGGCAGCGTGATGAGCCTGCAGTGCCCGAGCAGACACCGCGCGGTCAGCGGCACTCAGATGGCCTGCGTGTGGAGCAGTAACAACACGCGCTGGAGCGGAGGAACACCCGAGTGCAGACCTTTGTCTCGGTTCGAGGACGAGGGCTTTCGTTTAGCTCTTCTCATGTCCTTCATCAGTGCCGCCATCATTCTCTTGATGAGCATCATCTTCATCACTTCCTGTCTGGTGAAACATGTGAAGCGAGAGGAGAGGAGAAAGATGGAGAGGTGAGAGAACCTGGAA

Function

NR:

description
LOC553450 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_00648100_00653861.mRNA True 387 mRNA 0.58 3 648100 653873

Neighbor

gene id symbol gene type direction distance location
CI01000050_00615170_00641706 NA coding upstream 6326 615170 ~ 641774 (+)
CI01000050_00457216_00463632 NA coding upstream 184454 456930 ~ 463646 (+)
CI01000050_00449181_00451580 NA coding upstream 196053 449181 ~ 452047 (+)
CI01000050_00376389_00376735 NA coding upstream 271136 376217 ~ 376964 (+)
CI01000050_00302983_00357876 CACNA1DB, CACNA1D coding upstream 289808 302983 ~ 358292 (+)
CI01000050_00678001_00716978 NA coding downstream 24026 677899 ~ 716978 (+)
CI01000050_00718711_00742201 NA coding downstream 64838 718711 ~ 742201 (+)
CI01000050_00753574_00762446 S35E2, SLC35E2B coding downstream 98501 752374 ~ 762767 (+)
CI01000050_00770066_00782851 CDK11A, CDK11B coding downstream 116193 770066 ~ 782972 (+)
CI01000050_00818849_00822703 UBIAD1 coding downstream 164976 818849 ~ 823139 (+)
G212257 NA non-coding upstream 813 647082 ~ 647287 (+)
G212107 NA non-coding upstream 98844 549023 ~ 549256 (+)
G212234 NA non-coding upstream 107240 540120 ~ 540860 (+)
G212230 NA non-coding upstream 113012 534848 ~ 535088 (+)
G212226 NA non-coding upstream 116918 530978 ~ 531182 (+)
G212113 NA non-coding downstream 4691 658564 ~ 659213 (+)
G212260 NA non-coding downstream 7741 661614 ~ 662448 (+)
G212261 NA non-coding downstream 9811 663684 ~ 664149 (+)
G212269 NA non-coding downstream 92074 745947 ~ 746578 (+)
G212104 NA non-coding downstream 110125 763998 ~ 764435 (+)
G212184 NA other upstream 213894 433684 ~ 434206 (+)
G212006 NA other upstream 510089 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 621688 12079 ~ 26412 (+)
CI01000050_01296683_01297763 SELENOK other downstream 642773 1296365 ~ 1298255 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other downstream 1037930 1691374 ~ 1698973 (+)
G212927 NA other downstream 2120966 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 2188946 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 3151270 3805143 ~ 3808870 (+)

Expression


Co-expression Network