CI01000050_00457216_00463632


Basic Information

Item Value
gene id CI01000050_00457216_00463632
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 456930 ~ 463646 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_00457216_00463632.mRNA
CTTTAAAACTGGCGTTATTATCCTCCGAAGCACTAGGTGTCGAAAGAACAAAAATGTATATCCAAAACGCCTAATGCCGCTGTCTCTGAGCTTCCGTAGTATTTACACTCACTCATGAATCCTTCATCATCTGAAATTGTTTGTTAAACGCGGTTTAACCCGCGATTTGTGTTTCAGAGCAAAAGCAGTTCCCGCTCTCGAGGGAGTCATGCGTTCAGGACAGCGACGACGCGCCGCAACGTCAAAATAGCCGGAGGATTGACAGTTTTGCATTGTGCGCGTGAGAATGTCGAGATCTGAAGGCAGCGACGCAGAGCTGCAGACAGCCGCGGGCTGGAGGAGAGAGACGAGAGAGAGACAGAGCGGCAAAACAGCTGGGAGACTCGATGTCTACATCATCAGTCCTCAGGGCAAGATCTTCAGGTCCAGGACTCAGCTGCGCAGATATCTGCTCTCACAAACTAACGTGGAGCTGCAGATCAGTGACTTTGACTTCTCAGTGTCTGATAAAACTCAACAAACGAGAGGAACACTGAAAGAGGAATCCAGCTGTCCTCTAAGAGCTGGAGAGACGGCAAATGAAAACATGGAGGAGCGTGGAGAAGAGGAGAGCGAGACCGGAGAGCAGAGCGGCCTGGACACAGAACGAGAGAATCCGTTAAATCCAGCTCTAGATGAACATTCATCCACTTCTGCTTCAGAGAGCCAAGAACACGATCCGTTAGAGACAGCCGGAGGAGTCGAGGGTGAAAACAAGAGCCTGAACCTCACGGAGTGTGTGTCTCCACCCAGAAACACTGAGAGCCGGTCGAAGTTATTTGCAGAGAAGCGGAAAACGAGTCCGTACTTCGGTGGAAGGAGTAACGCATTTGGACACAACGTGTCGCTGGATGGTGTCTGTTTCAACGCTCAGGGTAAAAGGAAGTGGACTCCGCCGCGCTCGCCCTACAACCTGGTGCAGGAGACCCTGTTTCACGACCCCTGGAAGCTTCTGGTGGCCACCATCTTCCTCAACAAGACCAGCGGTGCTCAGCAGGTTTTGAAACAGCTGACACGTGGATGTGATGTGTTCGTCTGTATTTCTGCAGGTAAGATGGCGATCCCGACGCTGTGGGAGTTTTTCGAGCGCTACCCGAGCGCAGACGTGACCCGAGCGAGTGACTGGAGGCCTCTGGCGCTCCTGCTGCAGCCGCTGGGTCTCAGCACACTCCGCGCAAAGACACTCATACGCTTCTCTGACGAGTATCTGAGTAAATCCTGGCGATATCCCATTGAGCTCCACGGCATTGGCAAATACGGCAATGACTCATACCGAATCTTCTGCGTGGAGGAGTGGAGAGAGGTGACACCAGATGACCACAAGCTCAACGACTATCATGCCTGGTTGTGGAGAAACCAGGAGCGCTTAGGAATCTGATTTTACTCATTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_00457216_00463632.mRNA True 1431 mRNA 0.52 8 456930 463646

Neighbor

gene id symbol gene type direction distance location
CI01000050_00449181_00451580 NA coding upstream 4883 449181 ~ 452047 (+)
CI01000050_00376389_00376735 NA coding upstream 79966 376217 ~ 376964 (+)
CI01000050_00302983_00357876 CACNA1DB, CACNA1D coding upstream 98638 302983 ~ 358292 (+)
CI01000050_00274836_00275609 NA coding upstream 180493 274695 ~ 276437 (+)
CI01000050_00235034_00262436 NA coding upstream 193311 235034 ~ 263619 (+)
CI01000050_00615170_00641706 NA coding downstream 151524 615170 ~ 641774 (+)
CI01000050_00648100_00653861 NA coding downstream 184454 648100 ~ 653873 (+)
CI01000050_00678001_00716978 NA coding downstream 214253 677899 ~ 716978 (+)
CI01000050_00718711_00742201 NA coding downstream 255065 718711 ~ 742201 (+)
CI01000050_00753574_00762446 S35E2, SLC35E2B coding downstream 288728 752374 ~ 762767 (+)
G212185 NA non-coding upstream 21418 435237 ~ 435512 (+)
G212143 NA non-coding upstream 160232 296456 ~ 296698 (+)
G212076 NA non-coding upstream 173665 283019 ~ 283265 (+)
G212141 NA non-coding upstream 174182 282487 ~ 282748 (+)
G212136 NA non-coding upstream 185665 271058 ~ 271265 (+)
G212190 NA non-coding downstream 2057 465703 ~ 466360 (+)
G212188 NA non-coding downstream 2948 466594 ~ 467370 (+)
G212225 NA non-coding downstream 67085 530731 ~ 530950 (+)
G212226 NA non-coding downstream 67332 530978 ~ 531182 (+)
G212230 NA non-coding downstream 71202 534848 ~ 535088 (+)
G212184 NA other upstream 22724 433684 ~ 434206 (+)
G212006 NA other upstream 318919 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 430518 12079 ~ 26412 (+)
CI01000050_01296683_01297763 SELENOK other downstream 833000 1296365 ~ 1298255 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other downstream 1228157 1691374 ~ 1698973 (+)
G212927 NA other downstream 2311193 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 2379173 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 3341497 3805143 ~ 3808870 (+)

Expression


Co-expression Network