Gene
RNA
| Item | Value |
|---|---|
| gene id | G212185 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000050 |
| NCBI id | null |
| chromosome length | 7556436 |
| location | 435237 ~ 435512 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU240706 | True | 221 | lncRNA | 0.47 | 2 | 435237 | 435512 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000050_00376389_00376735 | NA | coding | upstream | 58273 | 376217 ~ 376964 (+) |
| CI01000050_00302983_00357876 | CACNA1DB, CACNA1D | coding | upstream | 76945 | 302983 ~ 358292 (+) |
| CI01000050_00274836_00275609 | NA | coding | upstream | 158800 | 274695 ~ 276437 (+) |
| CI01000050_00235034_00262436 | NA | coding | upstream | 171618 | 235034 ~ 263619 (+) |
| CI01000050_00148346_00149410 | RHO | coding | upstream | 285456 | 148220 ~ 149781 (+) |
| CI01000050_00449181_00451580 | NA | coding | downstream | 13669 | 449181 ~ 452047 (+) |
| CI01000050_00457216_00463632 | NA | coding | downstream | 21418 | 456930 ~ 463646 (+) |
| CI01000050_00615170_00641706 | NA | coding | downstream | 179658 | 615170 ~ 641774 (+) |
| CI01000050_00648100_00653861 | NA | coding | downstream | 212588 | 648100 ~ 653873 (+) |
| CI01000050_00678001_00716978 | NA | coding | downstream | 242387 | 677899 ~ 716978 (+) |
| G212143 | NA | non-coding | upstream | 138539 | 296456 ~ 296698 (+) |
| G212076 | NA | non-coding | upstream | 151972 | 283019 ~ 283265 (+) |
| G212141 | NA | non-coding | upstream | 152489 | 282487 ~ 282748 (+) |
| G212136 | NA | non-coding | upstream | 163972 | 271058 ~ 271265 (+) |
| G212017 | NA | non-coding | upstream | 245630 | 106065 ~ 189607 (+) |
| G212190 | NA | non-coding | downstream | 30191 | 465703 ~ 466360 (+) |
| G212188 | NA | non-coding | downstream | 31082 | 466594 ~ 467370 (+) |
| G212225 | NA | non-coding | downstream | 95219 | 530731 ~ 530950 (+) |
| G212226 | NA | non-coding | downstream | 95466 | 530978 ~ 531182 (+) |
| G212230 | NA | non-coding | downstream | 99336 | 534848 ~ 535088 (+) |
| G212184 | NA | other | upstream | 1031 | 433684 ~ 434206 (+) |
| G212006 | NA | other | upstream | 297226 | 82604 ~ 138011 (+) |
| CI01000050_00012155_00026251 | NA | other | upstream | 408825 | 12079 ~ 26412 (+) |
| CI01000050_01296683_01297763 | SELENOK | other | downstream | 861134 | 1296365 ~ 1298255 (+) |
| CI01000050_01691894_01697791 | SULT1ST2, SULT1ST3 | other | downstream | 1256291 | 1691374 ~ 1698973 (+) |
| G212927 | NA | other | downstream | 2339327 | 2774839 ~ 2775133 (+) |
| CI01000050_02852118_02864754 | RNF122 | other | downstream | 2407307 | 2852118 ~ 2865822 (+) |
| CI01000050_03807697_03808793 | CLCN5B, CLCN5 | other | downstream | 3369631 | 3805143 ~ 3808870 (+) |
